Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00520 ATGGAGTTTGACCTTGAAAACCCACTAGCAAATCTCTACGACCACCTCGCTGCTGACAACGATGTCCCAGCTCTGTTCCTCGTCGAATCTGACCATATCCCGTCAAAAAACTATTTTCTCAACCTGCAAGCCAGTGACTTTGATGTCTCTGTTAGAAGAGAAATCACTTCGCTCATCTCACAGTTTTGCCGCAAGCTCGATCCACTGTTGTCCTACCTTGCCATCAACTATCTTGATCGGTTCTTGTCCAACCATGCTGAACTGCAACTCAAACCGTGGGTGATAAGGCTTATTGCAATATCTTGTACTTCGCTAGCTACCAAAATGAAGAAAACAGAATTTTCCCTCACTGATATACAGGGTGATGGTGGTGTCATATTTGACACAGATACGATAAGAAAAATGGAGTTTCTTATATTGGGAGCTCTGGAATGGAGAATGCGTTCAATCACTCCATTCAGTTTCATCTCTTTCTTCGTATCTTTCTTCAATCTCAAAGACCCCAGTTTGACCCATGTTCTTAAAGCTAGAGCTGTGGAAATCATATTTAAATCTCAAAGTGATATACAAGTTTTGCAGTTCAAGCCATCTGTAATCGCTGGTTCTGCTCTTCTCTCAGCATCACATGAACTACTTCCCTTCCAATTTCCTTGCTTTATGGAAGCAATATCCAGTTGTCAATATATAAGTCAAGATATAATGTTACATTGTTACAATGTGATGCAAGAAATGCTTATGAATGAAAACGAGCCAATGTATGATGTGGTTGCTTGTTCGGAAACACCTACCAATGTTTTAGACCATCACATCTTCAGTTCAGGAAGTGAAGTAACCAATGGAATCACCATAGCTACCATCACCCAAAGACAAGAGAAGAACATCAAAAAGAGGAAAACCAATGGCTGTGAGAACAATTATACGGTTGAAACTGTTCAGATTGAATAA 945 0.4021 MEFDLENPLANLYDHLAADNDVPALFLVESDHIPSKNYFLNLQASDFDVSVRREITSLISQFCRKLDPLLSYLAINYLDRFLSNHAELQLKPWVIRLIAISCTSLATKMKKTEFSLTDIQGDGGVIFDTDTIRKMEFLILGALEWRMRSITPFSFISFFVSFFNLKDPSLTHVLKARAVEIIFKSQSDIQVLQFKPSVIAGSALLSASHELLPFQFPCFMEAISSCQYISQDIMLHCYNVMQEMLMNENEPMYDVVACSETPTNVLDHHIFSSGSEVTNGITIATITQRQEKNIKKRKTNGCENNYTVETVQIE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00520 314 Pfam Cyclin, C-terminal domain 150 250 IPR004367 -
Pte17g00520 314 Gene3D - 27 239 - -
Pte17g00520 314 FunFam D6-type cyclin 35 145 - -
Pte17g00520 314 SUPERFAMILY Cyclin-like 132 252 IPR036915 -
Pte17g00520 314 SUPERFAMILY Cyclin-like 22 147 IPR036915 -
Pte17g00520 314 FunFam D6-type cyclin 146 239 - -
Pte17g00520 314 CDD CYCLIN_AtCycD-like_rpt2 172 241 - -
Pte17g00520 314 Gene3D - 35 148 - -
Pte17g00520 314 PANTHER CYCLINS 33 246 IPR039361 -
Pte17g00520 314 SMART cyclin_7 57 141 IPR013763 -
Pte17g00520 314 Pfam Cyclin, N-terminal domain 28 147 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00520 Pte-Chr17 7139454 7141534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00520 1 296 Core Cell Cycle Gene Families AT4G03270 45.455 7.79e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00520 K18812 - qsu:111984715 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00520 17 7139454 7141534 Pte17g00520 17 7139454 7141534 RCT