Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00509 ATGGGGGGTTGTGTCTCAACTAGTAGCCAGAGTACTGGTAGTAGCAGGAGCACTGGAGAGACTGTCTCTCCATCTTGCATGGAAATCACGTTCTGCGGGCAAAAGAAAACAAGGAAAACACTTCCAGATCACGTTGTTTCACTGCAACATTTATCATCCATACCCAATCGGCTTTTTACAAATGGGAAGACCAGAACTTCTTGCATATTTACACAGCAAGGTCGCAAGGGCATCAACCAGGATGCTTTGATTGTGTGGGAAGATTTCATGTCGGAAGATGTTATCTTCTGTGGTGTCTTTGATGGTCATGGTCCACATGGCCACCATGTTGCGCGCAAGGTGCGTGATGTGCTGCCTATTAAGCTGCTTTCATTATTAGACACCAGTCAGTCAAGGCAAGATGGTCCAGGTACAACTTGCTTCAAGGAGAAGCAGAAGAAGCTTGATGGTGGAGAGACCAAGAAGGACTGTTCAGCTGAGGAAAATTTAAATTCTATCTGGAAAGAAGCTTTCCTGAAGTCATACAAGGCTATGGATAAAGAGCTGAGATCTCACCCTAACTTGGACTGCTTCTGTAGTGGTAGCACTGCTGTAACTATAGTGAAGCAGGGATCAAATTTATTTATGGGAAACATTGGTGATTCACGAGCAATCATGGGATCCAAGGACAATAATAACTCAATGATGGCAATCCAGTTGACTATTGATTTAAAGCCTGATTTACCCAGGGAGGCAGAAAGAATAAATCGATGCAAGGGAAGAGTTTTCGCGTTGCAAGATGAACCTGAAGTGCCTAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCCCGTGCATTTGGAGATTTTTGTCTGAAGGAGTATGGGGTGATTTCGATTCCTGAATTCTCTCATCGGACTCTTACAGACAGAGATCAGTTCATAGTTCTTGCATCAGATGGAGTTTGGGATGTCTTGAGCAATGAGGAAGTGGTTGAGATAGTATCCTCAGCTCCATCCCGGGCATCAGCTGCAAGGATTCTTGTGGACTCTGCAGCTAATGAGTGGAAAATCAAATACCCGACGTCGAAAATTGATGACTGTGCTGTGGTTTGTTTATTTTTGGATGGTAAAATGGATGGTGAATCGGAAGACAAAGAGAAAGGCTTCTCATCGGCTACCAACCATAGTAACCACTCAAACACTGCAATTGAATCAGATGATGGGCAGAAATCTGAGCCTTCCTTGCAGAGAAACTTCACTGTCAGACCCTTGGAAGATAAGAATACTTATGCGCAACTACTTACTGAAGTTAGAGACGTAACATCATCAACTGAAGATCAAAACTGGTCAGGGTTGGAAGGTGTCACTCGGGTGAACTCATTGGTTCAACTTCCTAGATTTTCTGTTGAAAGGGGTAACTCTTGA 1416 0.4393 MGGCVSTSSQSTGSSRSTGETVSPSCMEITFCGQKKTRKTLPDHVVSLQHLSSIPNRLFTNGKTRTSCIFTQQGRKGINQDALIVWEDFMSEDVIFCGVFDGHGPHGHHVARKVRDVLPIKLLSLLDTSQSRQDGPGTTCFKEKQKKLDGGETKKDCSAEENLNSIWKEAFLKSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDNNNSMMAIQLTIDLKPDLPREAERINRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPSRASAARILVDSAANEWKIKYPTSKIDDCAVVCLFLDGKMDGESEDKEKGFSSATNHSNHSNTAIESDDGQKSEPSLQRNFTVRPLEDKNTYAQLLTEVRDVTSSTEDQNWSGLEGVTRVNSLVQLPRFSVERGNS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00509 471 SUPERFAMILY PP2C-like 58 373 IPR036457 -
Pte17g00509 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 371 IPR001932 -
Pte17g00509 471 MobiDBLite consensus disorder prediction 389 419 - -
Pte17g00509 471 MobiDBLite consensus disorder prediction 1 22 - -
Pte17g00509 471 FunFam probable protein phosphatase 2C 52 57 374 - -
Pte17g00509 471 MobiDBLite consensus disorder prediction 380 419 - -
Pte17g00509 471 Pfam Protein phosphatase 2C 92 346 IPR001932 -
Pte17g00509 471 CDD PP2Cc 72 371 IPR001932 -
Pte17g00509 471 Gene3D - 56 373 IPR036457 -
Pte17g00509 471 PANTHER PROTEIN PHOSPHATASE 66 369 IPR015655 GO:0004722|GO:0006470
Pte17g00509 471 SMART PP2C_4 50 369 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00509 Pte-Chr17 6964642 6967213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00509 1 467 PP2C-type Phosphatase Gene Family AT1G03590 67.579 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00509 - - qsa:O6P43_000691 769.615