Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00506 ATGATGGGTTGGAAGAGATCTACTTCAGAGTTAGAAAACTTGAAGATCTGCGTGCAGGTTTTATTGGGTTATGCGCTGATCTGGACTGTTAACTTCTCATGTGGAATTACGAATTCAAATGACGTGACTGCAATTGAAAGCTTATTCACTGCAATGGGTGCCCCGGTTCTCCCTGGCTGGGTTGCTGGTGGGGGTGACCCTTGTGGTCAAGCATGGCAAGGTGTTCAATGCAATGGTTCTGACATTATGGGCATAGTTCTTAATGCTGCAAATTTGGGAGGAGAATTGGGTGATAGTTTAGGGGACTTCACTTCTTTGGTGACAATAGATCTAAGCAACAATCATATTGGGGGCAGTATCCCATCCAGTTTACCTGTTGCCATGCAACACTTTTTTCTTTCAGCGAACCAATTCACTGGAAGCATTCCGACCTCTTTATCAACTTTGACTCAATTGAAAGACATGTCTCTGAACGAAAATCAGTTAACTGGAGAAATACCAGATGCCTTTCAATCAATTACTGGGCTGATTAATCTAGATTTGTCAAACAACAATTTGAGTGGGGCATTGCCTCCTTCTATGGAGAGTCTGTCAACTCTTACCACCCTAAATTTGCAGTACAATCAACTTTCAGGTACCCTTGATGTCTTGCAAGATCTCAATCTCAAAACTTTGAATATTGAGAATAACAACTTTGCTGGACAGATACCCCAGAAGTTGTTGAGCATCCCAGACTTTAAAAGCGATGGAAATCCGTTCAATGTTGTTAACACTACTATGGCCCCTGTGCCTTCTCCTCTTTATCCTGTAATCCCTCCTCCGGCGCAACGTGGTTCTGGGACACCATCTGATTCCAGAGCTCCACCATCTGATCCCAGAGCTCCACCATCCGATCACTCACCTCCCAAATCAGCTGATGGGCCATCTGCACAAGCAGTATCTAAAACGGAAAGATCAAGGAAATCTGCAATCATTAAAAGGGTTGTCTTGATATCTCTTGCAGGTGTATTTACAATTATAATTTTGCTATTAGCATTAGCACTTTGTATGCCAAGATTTAAGAGGAGGAGAGAGGTTGAAAGAATTTCCAGGAGACACAGAATTGGTGCATATGAAGGTGATAGGCCAAATCCTGGGGAGAACAAAACCTCGATCCATTCAACCAACAAAACAGAGAAAGTAAGAAAAGAAACTGTGCCTGGGCCACAGGACAATTTTCAAGCTGAGACCAGGAAAGTGGGTGCTATCCCAAAGCCACAGGAAGAGCAACGTAGAAATGTTGAAACAATAGGAATAGTAGAAAAGAAAGAGGATCATGAGATAGATATGAGTGCATATGATGTCTATTTGACACCTCCACCTCCCCCACCCCGACCTCCACCCCCGCCGCCTCCTCCTCCTCCTCCTCCTCCCACACCACCACCTGTTGATAGGCTCATTATAGAGCCAATTGCATCCCCTGATGTAACTAACGATAAGCATTCTACAAAAAGTGTTCTCCCAGCAACAACTGCAAAGTCTTTCACCATTGCATCACTTCAACAGTATACAAACAGTTTTTCTCAGGAGAATCTGATAGGCTCAGGTATGCTGGGGACTGTTTATCGGGCACAGCTTCCTGATGGAAAGGTATGA 1635 0.4391 MMGWKRSTSELENLKICVQVLLGYALIWTVNFSCGITNSNDVTAIESLFTAMGAPVLPGWVAGGGDPCGQAWQGVQCNGSDIMGIVLNAANLGGELGDSLGDFTSLVTIDLSNNHIGGSIPSSLPVAMQHFFLSANQFTGSIPTSLSTLTQLKDMSLNENQLTGEIPDAFQSITGLINLDLSNNNLSGALPPSMESLSTLTTLNLQYNQLSGTLDVLQDLNLKTLNIENNNFAGQIPQKLLSIPDFKSDGNPFNVVNTTMAPVPSPLYPVIPPPAQRGSGTPSDSRAPPSDPRAPPSDHSPPKSADGPSAQAVSKTERSRKSAIIKRVVLISLAGVFTIIILLLALALCMPRFKRRREVERISRRHRIGAYEGDRPNPGENKTSIHSTNKTEKVRKETVPGPQDNFQAETRKVGAIPKPQEEQRRNVETIGIVEKKEDHEIDMSAYDVYLTPPPPPPRPPPPPPPPPPPPPTPPPVDRLIIEPIASPDVTNDKHSTKSVLPATTAKSFTIASLQQYTNSFSQENLIGSGMLGTVYRAQLPDGKV* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00506 544 MobiDBLite consensus disorder prediction 447 498 - -
Pte17g00506 544 MobiDBLite consensus disorder prediction 370 425 - -
Pte17g00506 544 Pfam Leucine Rich Repeat 221 237 IPR001611 GO:0005515
Pte17g00506 544 MobiDBLite consensus disorder prediction 449 480 - -
Pte17g00506 544 PRINTS Leucine-rich repeat signature 197 210 - -
Pte17g00506 544 PRINTS Leucine-rich repeat signature 176 189 - -
Pte17g00506 544 MobiDBLite consensus disorder prediction 288 302 - -
Pte17g00506 544 Gene3D Phosphorylase Kinase; domain 1 485 544 - -
Pte17g00506 544 SUPERFAMILY L domain-like 64 242 - -
Pte17g00506 544 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 543 - -
Pte17g00506 544 Gene3D Ribonuclease Inhibitor 39 257 IPR032675 -
Pte17g00506 544 MobiDBLite consensus disorder prediction 267 318 - -
Pte17g00506 544 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 38 266 - -
Pte17g00506 544 Pfam Leucine rich repeat 130 186 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00506 Pte-Chr17 6912495 6917062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00506 27 544 Strubbelig Receptor Gene Family AT4G03390 51.521 4.29e-144 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00506 - - qsa:O6P43_028775 559.681