Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00505 ATGAATCTTTTTGGGATGTTGATCTCCAGTTATGATATATGCTTTCAGCTATCAGGACAACTGATGGCTGCTTATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATATACACTTACCAGAGTGATGTTTACAGTTTTGGAGTGGTTATGTTGGAACTTTTAACAGGTCGAATGTCACATGACAGGACACGTCCTCGTGGGGAGCAGTTCCTGGTAAGATGGGCAGTTCCCCAGCTTCATGATATTGATGCATTGACGAGAATGGTTGATCCATCTCTAATTGGGAACTATCCAGCTAAATCTTTATCAAACTTTGCTGACATAATATCTCGATGTGTTCAGTCTGAACCAGAATTTCGGCCACCAATGTCTGAAGTTGTTCAGGATTTACTGGACATGGTAAGGAGAGAGCGTTATGGCAGTGGATCTGATTGA 435 0.4207 MNLFGMLISSYDICFQLSGQLMAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRMSHDRTRPRGEQFLVRWAVPQLHDIDALTRMVDPSLIGNYPAKSLSNFADIISRCVQSEPEFRPPMSEVVQDLLDMVRRERYGSGSD* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00505 144 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 4 142 - -
Pte17g00505 144 SUPERFAMILY Protein kinase-like (PK-like) 16 128 IPR011009 -
Pte17g00505 144 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00505 144 Gene3D Transferase(Phosphotransferase) domain 1 9 141 - -
Pte17g00505 144 PANTHER OS01G0253100 PROTEIN 20 136 - -
Pte17g00505 144 Pfam Protein tyrosine and serine/threonine kinase 23 130 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00505 Pte-Chr17 6911131 6911776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00505 7 142 Strubbelig Receptor Gene Family AT4G03390 85.294 7.63e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte17g00505 PK_Tyr_Ser-Thr 4.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00505 - - qsa:O6P43_028775 233.032