Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00489 ATGGGGTTGATTGGATTCATAGGCATCTTGTTTGTGACAACAATGATGCTCCTTACTTCATCTCTAGGTTTCCAGTTCTACGTGGGTGGCAAAGATGGCTGGGTTTGGAAGCCATCTGAAGACTACAATCACTGGTCTCACAGAAACAGGTTTCAAGTCAATGATACTCTCTATTTCAAGTACAACGAAGGTAGTGATTCAGTGTTGGAGGTAAAAGAGGATGACTACAACTCTTGCAACAACAAGAGCCCCATTCAGGCAATGAATGATGGGGAGACAGTCGTCACCTTAGACAGGTCAGGTCCCTACTATTTCATCAGTGGTAACATGGATCGTTGCCGGAAGGGTCAGAAACTGTTTCTGGTTGTCATGGCCGTGAGACCCAGCAAACCTCCCATTCACCCTCCTGTTTCTCCAGTGACGCCAGCTACCTCACCTCTTGCACCGTCCCCACAGACTACATCACCTGTGCCAAGTGTATCTTCATCGCCTGCACCCGGTCCAATTCCAACTCGAGTATATGCTCCTGTTCCCGCTCCAATGGAGAACACCGCTTCGGCAAGCTCTGGTTTAGCTATAGCTGTGTTAAGTTTGATTGTTGTTGGCTTCATGTAA 615 0.4764 MGLIGFIGILFVTTMMLLTSSLGFQFYVGGKDGWVWKPSEDYNHWSHRNRFQVNDTLYFKYNEGSDSVLEVKEDDYNSCNNKSPIQAMNDGETVVTLDRSGPYYFISGNMDRCRKGQKLFLVVMAVRPSKPPIHPPVSPVTPATSPLAPSPQTTSPVPSVSSSPAPGPIPTRVYAPVPAPMENTASASSGLAIAVLSLIVVGFM* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00489 204 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Pte17g00489 204 Pfam Plastocyanin-like domain 36 117 IPR003245 GO:0009055
Pte17g00489 204 PANTHER BLUE COPPER PROTEIN 19 149 IPR039391 GO:0009055
Pte17g00489 204 MobiDBLite consensus disorder prediction 132 153 - -
Pte17g00489 204 FunFam Early nodulin-like protein 1 23 128 - -
Pte17g00489 204 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Pte17g00489 204 CDD OsENODL1_like 24 124 IPR041846 -
Pte17g00489 204 MobiDBLite consensus disorder prediction 132 166 - -
Pte17g00489 204 Gene3D - 23 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00489 Pte-Chr17 6562920 6563789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00489 9 168 Phytocyanin Superfamily AT4G28365 54.268 4.15e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00489 - - pop:18106405 189.889