Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00487 ATGGGTTGCATATGTTCTAAGGTCTCAGCTGTTGCGGATGGCCGGGAAGATTTACCAAATAAATCGCCATCAGAGAATTCTGCTAGAAACGATGGGAAAGTTTTGGTAAAAGACAAGGTGGATAGAAATCATTTCAGAGTGTCTATGATTGGCATCAAAGATCATGGCGTGATAAAGTTGTATCATGATAAGAAGAAAGAAGAGGGTCCTGAGGTAACACGTCTTAAATTAAATCATCCCAGCTTTGGAAGGGTCCCAAAGGCTGCATTTGGAGAGCAGGTTGCCGCTGGATGGCATGATTGGCTTTCTGCAGTTGCAAGTGAAGCTATCTCTGGATGGGTGCCACGGTGCGCTAATACATTTGAGAAGTTAGATAAAATTGGCCAAGGAACCTATAGTAGTGTTTATAGGGCTCGTGACATGACATACCAAAAAGTCGTTGCTTTGAAGAAAGTACGGTTTGATAATCTTGATCGTGAGAGTGTGAAATTTATGGCAAGGGAAATCCTTGTTCTACGTAGGCTACAACATCCAAACGTTATAAAGTTGGAAGGATTGATAACTTCAAAAATGTCTCGTAGCTTGTACCTTGTCTTTGAGTACATGGAACATGATCTTACAGGACTGGCATCAAGGCCTGGCATTGAGTTTTCTGAGTCGCAGGTTAAATGCTACATGAAGCAACTTCTTAGTGGGCTTGATTATTGCCATACTCAAGGAGTCCTGCACCGTGACATAAAGGGCTCCAATCTCCTTATTGATAATAGTGGGATCTTAAAGATTGCAGACTTTGGTTTGGCAAGTTTTTTTGATCCTGACCACTGTGTGCCATTGACAAATCGTGTGGTTACTCTCGGGTACAGACCACCCGAACTGTTACTGGGAGCCTCTCACTACAGAGTTGCGGTGGATTTGTGGAGTGCTGGTTGCATACTTGGAGAACTGTACACTGGAAAGCCTATATTGGCAGGAAAAACAGAGGTTGAACAATTACATAAGATATTCAAGCTGTGTGGGTCGCCTTCTGAAGATTATTGGGGAAAATTGGGTTTACTAAATGCAGCACTATTCAAGCCGCCACATTCTTATAGATGCTATCTTGCTGACATGTTCAAGCACATTCCAGCTGCTTCTGTAAAGCTAATCAAGACCTTACTCTCCCTAGACCCTGCATGTCGAGGAACAGCAGCTACTGCACTCGAAAGCGAGTTCTTCACAACGGAACCTCTTGCTTGTGATCCTTCAAGTTTACCAGCATATCCTCCCAGCAAAGAGATTGACACCAAAGTGTTGGTTGAAGTTTGCAGAAGGCAAGGAGCCAGTGGCCTAAGGGAGCAAAAATTTGGCTTGGGAATTCAACCAGAGAAAGAGCTTCCAGCAATTCCTGTCGCGAAAGCTAATGCAAAGCAACTCTCATCGATGCAGACGCAGAGAGCTCATGTTCATTCAAGTTCAAAGACCCGAAGTCAATTGATCAATGTGCACAGGAATGAATCTCTTTCTGGTTTTCTGGTTGGTCCACATAAACAGTCAGTTGATGTAAACAAAATCAAGAGAGAACGCCAGGATTATGTTTATATGAAGCCTTCATATTCAGGACCATTAGTGCATGGTACTGAATGGGCAAAGGCTGGTAAGGAAGTTGATGCCCTGTCCATGTATCCTAACAAAGTGAAATTATCACACCTATCAGGTTTCATAGAAACTAAGGCGCAATGGGCGGAGATAAGGCAGAAAAACGAGGTACTGCACAGACAGAAAACACACTTCCAAATGGAAGATGTATGGGATTTAACGATGGATCACAATACTCAGAGGTTTGCAGAATTCCACCATAATGAAGATGGAGGATACAACACCAAAGATGCAACACGGGAAATGCGTGGGTCCAAGGGAAACAAGATTTATGTTTCTGGTCCATTACTGGTTTCATCAAACAATGTGGATCAGATGCTTAAAGATCATGACCAAAGAATACAGGAATTTTCACGACGAATGCGACTTGACAAGACAACAGCCGATAGAGTTTACAAGCAGCGTAAGTAG 2046 0.4301 MGCICSKVSAVADGREDLPNKSPSENSARNDGKVLVKDKVDRNHFRVSMIGIKDHGVIKLYHDKKKEEGPEVTRLKLNHPSFGRVPKAAFGEQVAAGWHDWLSAVASEAISGWVPRCANTFEKLDKIGQGTYSSVYRARDMTYQKVVALKKVRFDNLDRESVKFMAREILVLRRLQHPNVIKLEGLITSKMSRSLYLVFEYMEHDLTGLASRPGIEFSESQVKCYMKQLLSGLDYCHTQGVLHRDIKGSNLLIDNSGILKIADFGLASFFDPDHCVPLTNRVVTLGYRPPELLLGASHYRVAVDLWSAGCILGELYTGKPILAGKTEVEQLHKIFKLCGSPSEDYWGKLGLLNAALFKPPHSYRCYLADMFKHIPAASVKLIKTLLSLDPACRGTAATALESEFFTTEPLACDPSSLPAYPPSKEIDTKVLVEVCRRQGASGLREQKFGLGIQPEKELPAIPVAKANAKQLSSMQTQRAHVHSSSKTRSQLINVHRNESLSGFLVGPHKQSVDVNKIKRERQDYVYMKPSYSGPLVHGTEWAKAGKEVDALSMYPNKVKLSHLSGFIETKAQWAEIRQKNEVLHRQKTHFQMEDVWDLTMDHNTQRFAEFHHNEDGGYNTKDATREMRGSKGNKIYVSGPLLVSSNNVDQMLKDHDQRIQEFSRRMRLDKTTADRVYKQRK* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00487 681 PANTHER CELL DIVISION PROTEIN KINASE 119 410 - -
Pte17g00487 681 CDD STKc_CDK9_like 121 405 - -
Pte17g00487 681 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00487 681 FunFam probable serine/threonine-protein kinase At1g54610 108 203 - -
Pte17g00487 681 Gene3D Transferase(Phosphotransferase) domain 1 209 439 - -
Pte17g00487 681 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00487 681 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00487 681 Gene3D Phosphorylase Kinase; domain 1 115 208 - -
Pte17g00487 681 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Pte17g00487 681 FunFam probable serine/threonine-protein kinase At1g54610 204 445 - -
Pte17g00487 681 SUPERFAMILY Protein kinase-like (PK-like) 114 411 IPR011009 -
Pte17g00487 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00487 Pte-Chr17 6540706 6547725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00487 113 448 Core Cell Cycle Gene Families AT5G10270 50.565 2.58e-111 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte17g00487 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00487 - - qsa:O6P43_000733 792.341