Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00482 ATGGCTTCTGGAAATTCGGGTCGGGTCAACTCGGGCTCAGAGGGTTTTGATTTTGCTTCGGATGACATCCTCTGCTCTTTATCCAATGGCACTCACGGGGATCCGATACTCCCCACAAATCACAGTAAGGATTTTCACAAAAGCAGAATGACAAGAACATCCGTGTTTTCTTCCACTCCCTACAATCAGCCGGAAGATTCTCTGGTCCAGGAGGTTTCCTCAGCTGTTGAGAAAAGCATGAAAAAGCAAACTGATAACATCATGCGTTTCCTGGAGGGGTTAAGCTCAAGGCTTTCGCAGCTGGAATTATATTGTTTCAATCTTGACAAATCTATAGGAGAAATGCGATCAGATTTAAATCGTGACCACGAGGAATCAGAGTCAAAGCTTAAATTTCTTGAGAAACATGTTCAAGAAGTCCATAGGTCTGTTCAAATTATACGTGACAAGCAAGAGCTAGTAGAGACACAAAAAGAACTAGCCAAGCTTCAGCTTGCTCAAAAAGATTCATCATCCTCAAACCATTCGCAGTCCAATGAGGAGAGAGCTTCCCACCCTGCATCTGACTCGAAAAAGCCTGATACACCACCTGAGCAGCAATTAGCTCTTGCTCTGCCACATCAAGTAGCCCCACAGCAACCTGTCGCCCCCTCCTCACAAGCAACAGCGCAGAATACTCCCCAAGTTAATCAGCAGCAACCATATTATATGACTCCAACCCCAATGCCAAATCTTCCACCTGTTGCTCAACTTCCCCAGAACCAATACATGCCTTCTGATTCCCAGTACAGGACACCCGAAGTGCAAGACCTCTCTAGGGTGGGTACACCATCACAAGTAACCCAGGCTCCCCCAGTTCAACCATTTCATCAATATCAGCAGCAGCAGTGGCCTCAACAATTACCTCAGCAGATGCAACCTCCACAACAGTCATCCATGCAACCACCAATGAGGTCCGCATCACCGATTGTTTATCCTTCCTATCCACAACCTCAACCATCAAATCCACCACCACAGGAGACAGTGCCAAGCAGCATGCCAATGCAAATGTCATATGCTGGAATTCCGGCTCCTGGATCCAGCCGTGCTGATACTGTGCCTTATGGATACAGTGGTAGTGGTAGACCTGTTGCACAGCATCCTCCTCAGCCAATGAAGACCTCATTTTCAGCTCCACCTGGTGATATGTTTGGAAATACAGGTACACATACGGCACTTCCTCCAGGTAGTGCATACATGATATATGAAAGTGATGGAAGGAGAACACAACATCCCCCTCAACCCTCACACTTCACTCAAGGTGGATATCCACCACCGAGTGGGTCCATTCAGAATCCACAAGCGAGTCATAATCCTATGGTCCGGAATCCAAGCCAGGCACAGTTTTACCGTGGCCATCCATACAACGAGTTGGTAGAGAAACTGGTGAACATGGGATTCAGGGGTGATCATGTGGCAATCGTAATTCAAAGAATGGAGGAGAGTGGGCAACCCGTTGATTTCAACTCTGTCCTTGACAGGCTGAATGCGCCTCCGTCAGTCGGGCCTCAGAGACCATGGTCAGGCTGA 1569 0.4774 MASGNSGRVNSGSEGFDFASDDILCSLSNGTHGDPILPTNHSKDFHKSRMTRTSVFSSTPYNQPEDSLVQEVSSAVEKSMKKQTDNIMRFLEGLSSRLSQLELYCFNLDKSIGEMRSDLNRDHEESESKLKFLEKHVQEVHRSVQIIRDKQELVETQKELAKLQLAQKDSSSSNHSQSNEERASHPASDSKKPDTPPEQQLALALPHQVAPQQPVAPSSQATAQNTPQVNQQQPYYMTPTPMPNLPPVAQLPQNQYMPSDSQYRTPEVQDLSRVGTPSQVTQAPPVQPFHQYQQQQWPQQLPQQMQPPQQSSMQPPMRSASPIVYPSYPQPQPSNPPPQETVPSSMPMQMSYAGIPAPGSSRADTVPYGYSGSGRPVAQHPPQPMKTSFSAPPGDMFGNTGTHTALPPGSAYMIYESDGRRTQHPPQPSHFTQGGYPPPSGSIQNPQASHNPMVRNPSQAQFYRGHPYNELVEKLVNMGFRGDHVAIVIQRMEESGQPVDFNSVLDRLNAPPSVGPQRPWSG* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00482 522 MobiDBLite consensus disorder prediction 212 238 - -
Pte17g00482 522 MobiDBLite consensus disorder prediction 326 343 - -
Pte17g00482 522 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 7 522 - -
Pte17g00482 522 MobiDBLite consensus disorder prediction 164 181 - -
Pte17g00482 522 MobiDBLite consensus disorder prediction 503 522 - -
Pte17g00482 522 Coils Coil 116 136 - -
Pte17g00482 522 Coils Coil 146 166 - -
Pte17g00482 522 MobiDBLite consensus disorder prediction 164 346 - -
Pte17g00482 522 MobiDBLite consensus disorder prediction 249 318 - -
Pte17g00482 522 Pfam UBA-like domain (DUF1421) 468 510 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00482 Pte-Chr17 6489732 6492937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00482 53 188 Trihelix Transcription Factor Family AT5G14540 33.824 9.84e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00482 - - qsa:O6P43_028808 633.254