Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00480 ATGGCGGATGGATCACAGCATCCATCTGTAATTCAAAAGCTACATGGGCATTCATATCTCATTTCTAGGCTTTCCCCTAATGGTCATACTAGAAACCACGGCATGAGTGGGCCAGCATGTAATGGCAATGGCCTTGCTATGGTGTCATCTTTATCCTCTGTTTGCGTGCAAGCTCCAGCAGAAAAGGGAAATTTTCTCGTGGATTTTCTGATGGGTGGAGTTTCTGCTGCTGTTTCTAAGACGGCTGCTGCTCCTATTGAACGGGTCAAGCTGCTGATACAAAATCAGGATGAGATGATCAAAAGTGGCAGATTGTCTGAACCTTATAAGGGAATTGGTGACTGCTTTGGCCGGACCATTAAGGATGAAGGCATGATTGCTCTTTGGAGAGGGAACACTGCTAATGTCATCAGATACTTCCCGACACAGGCCTTGAATTTTGCTTTCAAAGATTACTTCAAGAGGCTATTTAACTTTAAAAAAGACAAGGATGGGTATTGGAAGTGGTTTGCTGGTAACTTGGCTTCTGGTGGGGCTGCTGGTGCTTCATCTCTTCTCTTTGTCTATTCTTTGGACTATGCTCGAACTCGTCTGGCCAATGATGCAAAGGCTGCAAAAAAGGGTGGTGAAAGACAATTTAATGGCATGATTGATGTTTATAAGAAAACCATTAAGTCTGATGGGGTTGCAGGGCTTTATCGTGGGTTCAACATCTCCTGTGTTGGAATCATTGTATACCGTGGTCTGTATTTTGGAATGTACGATTCTCTCAAGCCTGTTGTTTTGGTTGGTGGAATGCAGGATAGTTTCTTGGCTAGTTTCCTGCTGGGATGGGGAATCACAATTGGTGCTGGGCTGGCCTCTTACCCAATTGATACTGTGCGTAGAAGAATGATGATGACTTCTGGAGAAGCTGTTAAATACAAGAGCTCTTTGGATGCTTTCAAACAAATTGTGAAAAAGGAGGGCACCAAATCACTCTTCAAAGGTGCCGGTGCAAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTTCTCGCTGGTTATGACAAATTACAGCTTATCATGTTTGGTAAGAAATACGGATCTGGCGGTGGCGGTTAA 1101 0.4432 MADGSQHPSVIQKLHGHSYLISRLSPNGHTRNHGMSGPACNGNGLAMVSSLSSVCVQAPAEKGNFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFGRTIKDEGMIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGMIDVYKKTIKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQIVKKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIMFGKKYGSGGGG* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00480 366 Gene3D Mitochondrial carrier domain 66 361 IPR023395 -
Pte17g00480 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 168 260 IPR018108 -
Pte17g00480 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 63 156 IPR018108 -
Pte17g00480 366 FunFam ADP,ATP carrier protein, mitochondrial 66 361 - -
Pte17g00480 366 PRINTS Adenine nucleotide translocator signature 273 289 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g00480 366 PRINTS Adenine nucleotide translocator signature 65 77 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g00480 366 PRINTS Adenine nucleotide translocator signature 109 130 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g00480 366 PRINTS Adenine nucleotide translocator signature 168 181 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g00480 366 PRINTS Adenine nucleotide translocator signature 142 154 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g00480 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 354 IPR018108 -
Pte17g00480 366 PRINTS Mitochondrial carrier protein signature 81 95 IPR002067 GO:0055085
Pte17g00480 366 PRINTS Mitochondrial carrier protein signature 277 299 IPR002067 GO:0055085
Pte17g00480 366 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Pte17g00480 366 PRINTS Mitochondrial carrier protein signature 233 251 IPR002067 GO:0055085
Pte17g00480 366 PRINTS Mitochondrial carrier protein signature 68 81 IPR002067 GO:0055085
Pte17g00480 366 PRINTS Mitochondrial carrier protein signature 131 151 IPR002067 GO:0055085
Pte17g00480 366 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 54 364 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pte17g00480 366 SUPERFAMILY Mitochondrial carrier 63 350 IPR023395 -
Pte17g00480 366 Pfam Mitochondrial carrier protein 167 260 IPR018108 -
Pte17g00480 366 Pfam Mitochondrial carrier protein 268 355 IPR018108 -
Pte17g00480 366 Pfam Mitochondrial carrier protein 64 160 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00480 Pte-Chr17 6473608 6476272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00480 3 356 Antiporters AT4G28390 81.572 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00480 K05863 - qsa:O6P43_028827 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00480 17 6473608 6476272 Pte17g00480 17 6473608 6476272 RCT