Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00474 ATGTTGACTGGCAAAGATATCCTTTACAAGATGAAGGCAAAGGCTCTCGGGTCATGTGCACCTGACACTGGAAAAGGGAAGAGTAAAAGTTCGAAGCATATCACACATGGATATCATTTGGTGAAGGGAAAATCAAATCATGCGATGGAAGACTATGTTGTTGCTGAGTTTAAGCACATTGAAGACAATGAATTAGGTCTATTTGCCATATTTGATGGCCATTTGGGCCATTCTGTTGCAAATTACTTGCAGACCCACCTTTTTGACAACATTTTACAACAGCATAACTTCTGGACTGAAACAGAAGATGCATTAAGGAGAGCATACCTTGCAACTGATGAGAAAATACTGAAAGAGGCGCCTGTCTTAGGAAGAGGAGGGTCAACCGCTGTAACTGCAATACTAATCAATGGTCAGAAGCTTGTAGTGGCGAATGTTGGAGATTCTCGTGCTGTTATATGCAAGAAAGGAAAGGCAAAACAACTATCAGTTGATCACGAACCAAGCAGGGAAAAATCAAAGATTGAAAGCCGTGGCGGTTTTGTATCGAATCTTCCAGGAGATGTCCCTCGTGTCGATGGACAGCTAGCCGTTGCAAGGGCTTTTGGTGATAAGAGCTTGAAAATGCACCTCAGTTCTGAACCCGATATTACAATAGAGATGATAGATGAAGATAGCGAGTTCCTAATTTTGGCAAGTGACGGAATATGGAAGGTTATGTCAAATCAAGATGCAGTGGAATGCATCAGACATATAAAGGACGCTCAGTCAGCAGCAAAGAACTTGATAGAAGCTGCTATCTCCAAGAAAAGCAAGGATGACATATCCTGCATTGTTAAGGTGGCTTTCATAAATGACAGATGTTCCTTCGGGAAGTGCTTATAA 885 0.4181 MLTGKDILYKMKAKALGSCAPDTGKGKSKSSKHITHGYHLVKGKSNHAMEDYVVAEFKHIEDNELGLFAIFDGHLGHSVANYLQTHLFDNILQQHNFWTETEDALRRAYLATDEKILKEAPVLGRGGSTAVTAILINGQKLVVANVGDSRAVICKKGKAKQLSVDHEPSREKSKIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDITIEMIDEDSEFLILASDGIWKVMSNQDAVECIRHIKDAQSAAKNLIEAAISKKSKDDISCIVKVAFINDRCSFGKCL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00474 294 CDD PP2Cc 36 279 IPR001932 -
Pte17g00474 294 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Pte17g00474 294 PANTHER PROTEIN PHOSPHATASE 30 279 IPR015655 GO:0004722|GO:0006470
Pte17g00474 294 Pfam Protein phosphatase 2C 46 275 IPR001932 -
Pte17g00474 294 Gene3D - 30 285 IPR036457 -
Pte17g00474 294 SUPERFAMILY PP2C-like 31 279 IPR036457 -
Pte17g00474 294 SMART PP2C_4 25 280 IPR001932 -
Pte17g00474 294 FunFam Probable protein phosphatase 2C 39 25 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00474 Pte-Chr17 6379934 6383376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00474 2 279 PP2C-type Phosphatase Gene Family AT3G15260 68.772 8.98e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00474 K17506 - pvy:116113300 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00474 17 6379934 6383376 Pte17g00474 17 6379934 6383376 RCT