Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00464 ATGACTCAGCTGAAAGTCCAAGACAACAACTTGAAAGCTATAGTTGAAAGAAACGAAGAAAGTGCCATTAGAGCTTGCCCTTCATGTGGTCACCATCTCAAATGCCAACAACAGTCTAAAATTCATGATCTGCCTGGACTGCCTGCGGGAGTGAAGTTTGATCCCACTGATCAGGAGCTTCTTCAACATTTAGAAGGAAAGGTGAGATCTGATCATGCTGATAAGCATCACCCCTTGATTGATGAATTCATTCCTACCATTGAAGGAGAGAACGGAATTTGCTACACCCACCCAGAGAAGTTGCCAGGAGTGAGCAAAGACGGTTTGATCCGCCATTACTTTCACCGACCTTCAAAAGCATACACCACAGGAACTAGGAAAAGGAGAAAGGTGCATTCAGATGCAGAAGGCAGCGAGACCCGATGGCATAAAACAGGTAAAACCAGGCCTGTCTACATAAGTGGCAAGCTGAAAGGATACAAGAAGATACTTGTGCTGTATACCAACTACGGGAAGCAAAGGAAGCCTGAGAAAACAAACTGGGTTATGCACCAGTACCACCTTGGACATAATGAAGAGGAGAAAGATGGGGAATTAGTGGTTTCCAAAATCTTCTACCAAACACAACCTAGACAATGTGGTTCCTTGCTGAAGGAGACTGTTGCACCCAAATTTAGAGGGACAAATGGGCATGAAGGCGCAAACCATAAGAGCAATGCATTAGTGCTTTACAATTACTCCCCTTTTATAACGTTTGATCAAGGTGGCCAACACAGAGCTGGCAGTACTCCTCAACTAATTTCTCAGTATGCTATCCACGATCATTCTTCTTCAGTTCCCTAA 843 0.4413 MTQLKVQDNNLKAIVERNEESAIRACPSCGHHLKCQQQSKIHDLPGLPAGVKFDPTDQELLQHLEGKVRSDHADKHHPLIDEFIPTIEGENGICYTHPEKLPGVSKDGLIRHYFHRPSKAYTTGTRKRRKVHSDAEGSETRWHKTGKTRPVYISGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGHNEEEKDGELVVSKIFYQTQPRQCGSLLKETVAPKFRGTNGHEGANHKSNALVLYNYSPFITFDQGGQHRAGSTPQLISQYAIHDHSSSVP* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00464 280 SUPERFAMILY NAC domain 39 207 IPR036093 GO:0003677|GO:0006355
Pte17g00464 280 MobiDBLite consensus disorder prediction 121 143 - -
Pte17g00464 280 Gene3D NAC domain 56 211 IPR036093 GO:0003677|GO:0006355
Pte17g00464 280 FunFam NAC domain-containing protein 73 56 211 - -
Pte17g00464 280 ProSiteProfiles NAC domain profile. 47 207 IPR003441 GO:0003677|GO:0006355
Pte17g00464 280 Pfam No apical meristem (NAM) protein 48 188 IPR003441 GO:0003677|GO:0006355
Pte17g00464 280 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 17 221 IPR044799 GO:0003700
Pte17g00464 280 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00464 Pte-Chr17 6061617 6063616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00464 21 226 NAC Transcription Factor Family AT4G28500 76.329 7.80e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte17g00464 NAM 7.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00464 - - qsa:O6P43_028856 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00464 17 6061617 6063616 Pte17g00464 17 6061617 6063616 RCT