Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00433 ATGGACTCTCCTTTGAGAGCTCCATCTCCGTCCCCGGTGACAGTACCGTCAAGGTCGGCAACCACGTCGTTTCCCAGCCGTGAAGACTGTTGGAGTGAGGATGCAACTTTTACTCTAATCGATGCATGGGGTGACCGTTACCTCCAGCTCAACCGTGGTAATCTACGTCAGCAACATTGGCAGGAGGTTGCCGGAGCAGTCAACTCCGTTCACGGTCGCGTCAAAAAAGCTGGTCGTACGGACGTCCAGTGCAAGAATCGAATCGACACTCTAAAGAAGAAGTATAAGATTGAGAAAGCTAGGGTTTCTGAATCGAATGGGTCGTATATTAGTCCTTGGCCTTTCTTCACTCGACTTGACGCTCTCATCGGAGATACTTTTCCGGCGAAGAAACCCTCTCCGCCGGTGAAATCCGGCCAGCGAAACAGAACCCATCCCATTTCGTTTCCCTGGATAACAACTCCGGTCCCCGTAGGTCCGCGATCTGGAACTCAGAAACGGCCGTCGCAGGCGTTGGACAATTCCTACTTTCGCCGAAACTTCTCTGCTTTTGCGGCAGCAAGGGCGGAAGCTGAAAACGCGGTAGACGACCAGTCTGACGGCTCGAGATCGAGCATGGGGAGAAGGAGGAAACCGGAAAGACCAGTAGGTGTTGACAAGGAGCGGGAATCAGAATTCGATTACAGAGAATTGGCAAAGGCCATAGAGAGGTTTGGAGATATATACCAGAGAATAGAGGCATCAAAGCAGAAGCAAATACTGGAGTTGGAGAAGCAAAGGATGCAGTTTGCCAAAGATTTGGAGTACCAAAGGATGCAATTATTTATGGAGACACAGGTTCAGCTTCTAAAAATCAAACGCACCAAGCGATCCGCTCGAGCTGACAATTACTCATAA 897 0.5017 MDSPLRAPSPSPVTVPSRSATTSFPSREDCWSEDATFTLIDAWGDRYLQLNRGNLRQQHWQEVAGAVNSVHGRVKKAGRTDVQCKNRIDTLKKKYKIEKARVSESNGSYISPWPFFTRLDALIGDTFPAKKPSPPVKSGQRNRTHPISFPWITTPVPVGPRSGTQKRPSQALDNSYFRRNFSAFAAARAEAENAVDDQSDGSRSSMGRRRKPERPVGVDKERESEFDYRELAKAIERFGDIYQRIEASKQKQILELEKQRMQFAKDLEYQRMQLFMETQVQLLKIKRTKRSARADNYS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00433 298 Gene3D - 31 97 - -
Pte17g00433 298 MobiDBLite consensus disorder prediction 158 172 - -
Pte17g00433 298 Pfam Myb/SANT-like DNA-binding domain 28 122 IPR044822 -
Pte17g00433 298 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 289 IPR044823 -
Pte17g00433 298 MobiDBLite consensus disorder prediction 1 27 - -
Pte17g00433 298 MobiDBLite consensus disorder prediction 190 223 - -
Pte17g00433 298 MobiDBLite consensus disorder prediction 131 172 - -
Pte17g00433 298 MobiDBLite consensus disorder prediction 193 223 - -
Pte17g00433 298 FunFam trihelix transcription factor ASIL2 31 97 - -
Pte17g00433 298 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00433 Pte-Chr17 5638334 5642295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00433 228 287 Trihelix Transcription Factor Family AT3G14180 48.333 1.91e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte17g00433 Myb_DNA-bind_4 9.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00433 - - qsa:O6P43_000824 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00433 17 5638334 5642295 Pte17g00433 17 5638334 5642295 RCT