Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00424 ATGATGTCAAGGTCGTACACCAATCTTTTAGATTTGGCTTCTGGTAATTTCCCAGCAATGGGAACTGGAAGTGGTTTTAAAGAGCGGAAACGACTTCCCAGGGTTATGACTTTGACGGGCAACGTAGCAGAGTTAGATGACGATCAAGCTCATAGTGTTTCTTCTGAAAATCCATCTATTGCTTCTCTTGATCGGGTGATCATTGTAGCAAATCAGCTTCCATTGAAAGCAAAGCGTAGAGATGAGAATAAAGGATGGGACATCAGTTGGAATGAGGATTCTTTGCTTTTACAGCTTAAGGATGGACTTCCAGAAGAGATGGAGGTTATTTACGTTGGATCATTGCGGGCTGATATTGATCTGAAAGAGCAGGATGACATGTCTCAGATTTTATTGGACAAATTTAAATGTGTTCCAACATTTCTGCCTGCCGACCTGTGGGCTAAATTCTATGATGGCTTCTGCAAGGGTCATCTGTGGCCACTTTTCCATTACAAGCTACCATTTTCAACTGATAAAACACATCGTTTTGATCGATCTTTATGGGAGGCTTATGTGTTGGCAAATAAATTATTTTTTCAGAAAGTAGTTGAAGTAATAAATCCAGAAGATGACTATATTTGGATTCACGATTACCACTTGATGGTACTGCCAACCTTCATAAGAAGACGGTTTAACAGAGTAAAATTGGGATTTTTCCTTCATAGCCCTTTTCCTTCTTCAGAGATATATAGGACTCTTCCTGTAAGAGAAGAAATACTTAAGGCTTTACTAAATTCTGATATCATTGGCTTCCACACCTTTGACTATGCTCGCCATTTCCTTTCTTGTTGCAGTCGCATGTTAGGTTTGGAGTATCAGTCAAAAAGGGGCTACCTGGGGTTGGAATACTATGGGAGGACTATCAGTATCAAGATTATGCCAGTTGGGGTTCACATGGGTCGAATTGAATCTGTGATGAAAATGGCGGATGAGGAGACTAAACTAAAGCAGCTCAAACAGCAGTTCAGAGGAAAAACAGTGTTGCTTGGTGTTGACGATATGGATATCTTCAAAGGTATTAATTTGAAACTTTTGGCAATGGAGCAGATGCTTAATCAGCATCCCGAATGGCAGGGTAGAGCTGTACTGATCCAGATAGTAAACCCTGCTAGAGGCAATGGAATTCATTTAGAGACCACAAAGGCTGAGATACAAGAAATCTGTACGAGAATAAACAGACTCTATGGCCGCCCTGGCTATGATCCAATAGTCTTTATTGACAGATTAGTTTCAGTTGCTGAAAAAGTTGCCTACTACAGTATTGCTGAGTGTGTTGTGGTCACTGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATTGCTTGTAGGCAGGGAATATCTGATTCTGGTCCCAAGAAGAGCGTGATTGTAATATCAGAATTTATTGGGTGCTCTCCATCACTTAGTGGAGCAGTCCGTGTGAATCCATGGAATGTTGAGACGACTGCAGAAGCACTGAGTGAGGCTATTTCAATGGCTGATTCAGAAAAACAGTTGCGGCATGAAAAGCATTATCGGTATATTAGCACTCATGATGTGGCTTATTGGGCGCGCAGTTTCTTGCAGGATATGGAACGAGCTTGCACAGACCTGGTGAGGAAACGATGCTGGGGAATTGGTCTCAGCTTTGGGTTTCGAGTTGTGGCACTTGATCCAAACTTTAGGAAGCTGTCAGTTGATGCCATTGTGTCATCTTATTTAAAGTCAAAGAATAGGGCTATTTTGTTAGATTATGATGGCACTGTAATGCCTCAGAACTCTATTAACAAGTCACCAAGTCAGGAGGTTATGTCAATTCTGAACACACTTTGTGCAGACTCAAAAAATGTAGTTTTCATCGTTAGTGGCAGGGGGAGGGAAAGCTTAAGTAATTGGTTCTCTCCCTGTGATAAGCTTGGGATTGCTGCAGAACATGGATACTTCATAAGGTGGGCACACAATGAAGAATGGGAAAACTGTGGTAAGAGCTCTGACTTTGGGTGGATGCAGATTGCGGAACCGGTGTTGAAATTGTATACGGAGTCTACGGATGGTTCTTGCATCGAAACTAAGGAAACCGCTTTGGTTTGGCAGTATCGGGATGCAGATGCGAGGTTTGGATCAGCTCAGGCTAAAGAACTCTTGGATCATCTTGAGAGTGTTTTGGCGAATGAACCAGTCGCTGTAAAAAGTGGTCAGTTTATTGTTGAAGTAAAGCCCCAGGGTGTGAGCAAAGGCCTAGTTGCTGAAAAAATCTTCTCATCAATGGCAGAGAACGGGAAACAGGCTGACTTCGTCCTATGCGTTGGTGATGACAGATCTGATGAAGACATGTTTGAAATTGTTGGCAGTGCATTGTCAAGAAATATACTTTCTCCCAATGCTTCTGTATATGGTTGTACAGTAGGACAAAAGCCGAGCAAAGCAAAATATTATCTGGATGACACTGGTGAAGTAAGAAGCATGCTCGAATCTATGGCCGAGGCTTCTTACTCTTCACTTCGCAAAGAAGAAACTGAAAGTTAA 2553 0.4199 MMSRSYTNLLDLASGNFPAMGTGSGFKERKRLPRVMTLTGNVAELDDDQAHSVSSENPSIASLDRVIIVANQLPLKAKRRDENKGWDISWNEDSLLLQLKDGLPEEMEVIYVGSLRADIDLKEQDDMSQILLDKFKCVPTFLPADLWAKFYDGFCKGHLWPLFHYKLPFSTDKTHRFDRSLWEAYVLANKLFFQKVVEVINPEDDYIWIHDYHLMVLPTFIRRRFNRVKLGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIESVMKMADEETKLKQLKQQFRGKTVLLGVDDMDIFKGINLKLLAMEQMLNQHPEWQGRAVLIQIVNPARGNGIHLETTKAEIQEICTRINRLYGRPGYDPIVFIDRLVSVAEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQGISDSGPKKSVIVISEFIGCSPSLSGAVRVNPWNVETTAEALSEAISMADSEKQLRHEKHYRYISTHDVAYWARSFLQDMERACTDLVRKRCWGIGLSFGFRVVALDPNFRKLSVDAIVSSYLKSKNRAILLDYDGTVMPQNSINKSPSQEVMSILNTLCADSKNVVFIVSGRGRESLSNWFSPCDKLGIAAEHGYFIRWAHNEEWENCGKSSDFGWMQIAEPVLKLYTESTDGSCIETKETALVWQYRDADARFGSAQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFSSMAENGKQADFVLCVGDDRSDEDMFEIVGSALSRNILSPNASVYGCTVGQKPSKAKYYLDDTGEVRSMLESMAEASYSSLRKEETES* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00424 850 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 717 849 - -
Pte17g00424 850 Gene3D - 590 822 IPR023214 -
Pte17g00424 850 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 58 317 - -
Pte17g00424 850 CDD GT20_TPS 65 541 IPR001830 GO:0003824|GO:0005992
Pte17g00424 850 Gene3D - 671 750 - -
Pte17g00424 850 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 587 704 - -
Pte17g00424 850 CDD HAD_TPP 589 829 - -
Pte17g00424 850 Gene3D Glycogen Phosphorylase B; 59 318 - -
Pte17g00424 850 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 44 837 IPR001830 GO:0003824|GO:0005992
Pte17g00424 850 FunFam Alpha,alpha-trehalose-phosphate synthase 319 525 - -
Pte17g00424 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 545 - -
Pte17g00424 850 Pfam Trehalose-phosphatase 591 824 IPR003337 GO:0003824|GO:0005992
Pte17g00424 850 Gene3D Glycogen Phosphorylase B; 319 525 - -
Pte17g00424 850 FunFam Trehalose-6-phosphate synthase 2 671 750 - -
Pte17g00424 850 Pfam Glycosyltransferase family 20 65 541 IPR001830 GO:0003824|GO:0005992
Pte17g00424 850 NCBIfam trehalose-phosphatase 585 836 IPR003337 GO:0003824|GO:0005992
Pte17g00424 850 NCBIfam HAD-IIB family hydrolase 590 794 IPR006379 -
Pte17g00424 850 SUPERFAMILY HAD-like 588 835 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00424 Pte-Chr17 5518695 5522514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00424 1 842 Trehalose Biosynthesis Gene Families AT1G06410 75.207 0.0 1348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00424 K16055 - qsa:O6P43_000837 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00424 17 5518695 5522514 Pte17g00424 17 5518695 5522514 RCT