Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00413 ATGGGAGCCAATAACGATAGTATGTTTCGTTATGCAGATGGGGTGGACAAGTTGTTGATGTTCTTCGGAACTTTGGGAAGCGTTGGAGATGGTTTGCAAATTCCTCTCACTATGTTCCTTCTTAGCGAAGTCATAAACACCTATGGTGATCCGAACAGGAATGTAACAATGCATGATGTAAACAAGTATTCACTTAGGCTTCTCCTTGCTGCAATAGGAGTTGGAGTTGCTGCCTTTGTTGAAGGACTGTGTTGGGCAAGAACTGCAGAGAGACAGACTTCAAAAATGAGAATTGAGTACCTAAAATCTGTCCTAAGACAAGAAGTTGGATTCTACGACAGTCAGGAAGCTGGTACTTCGACAACCTTCCAAGTTGTCTCACTCATCTCCTCTGATGCTAGTGCAATTCAAGTTGCTCTATGTGAGAAGATACCTGACTGCCTTGCTTACATGTCAACTTTTTTCTTCTGCCACATTTTTGCGTTTGTGCTGTCATGGAGACTAACATTAGCAGCTATACCAATTTCAATCATGTTCATCTTTCCAGCACTTGTATTCGGGAAGATGTTGATGGACATGGTAATGAAAATGATGGCATCGTATGGTGTTGCCGGTGGAATTGCCGAACAAGCTATTTCTTCAATACGTACAGTTTACTCATACGTAGGAGAGAATGAGACACTGAAGAGGTTTAGCAGTTCACTTGAGAAAACGTTGGAGTTTGGAGTGAAACAAGGACTTGCAAAAGGATTGATGTTAGGAAGCTTGGGGATGATCTACGTAGGTTGGGGATATCAGGCTTGGGTTGGAACATATTTGGTTAGGCGAAAACATGAACAAGGTGGTCATGTATTTATAGCAGGATTCAATGTTCTTATGGGAGGATTGAGTGTTTTGAGTGCACTGCCTAATCTGACCGCCATTACTGAGGCCAAGAGTGCAGTATCCCGCATTTTTGAAATGATCGATAGAGTTCCTTCCATAGATACTGAAGACAAAAAGGGAAAGGCTTTATCATATTTCCAGCTGGTAAGAAGGTAG 1041 0.4207 MGANNDSMFRYADGVDKLLMFFGTLGSVGDGLQIPLTMFLLSEVINTYGDPNRNVTMHDVNKYSLRLLLAAIGVGVAAFVEGLCWARTAERQTSKMRIEYLKSVLRQEVGFYDSQEAGTSTTFQVVSLISSDASAIQVALCEKIPDCLAYMSTFFFCHIFAFVLSWRLTLAAIPISIMFIFPALVFGKMLMDMVMKMMASYGVAGGIAEQAISSIRTVYSYVGENETLKRFSSSLEKTLEFGVKQGLAKGLMLGSLGMIYVGWGYQAWVGTYLVRRKHEQGGHVFIAGFNVLMGGLSVLSALPNLTAITEAKSAVSRIFEMIDRVPSIDTEDKKGKALSYFQLVRR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00413 346 CDD ABC_6TM_Pgp_ABCB1_D1_like 20 318 - -
Pte17g00413 346 FunFam ABC transporter B family member 15-like 8 341 - -
Pte17g00413 346 Pfam ABC transporter transmembrane region 20 295 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte17g00413 346 SUPERFAMILY ABC transporter transmembrane region 9 329 IPR036640 GO:0005524|GO:0016020
Pte17g00413 346 Gene3D ABC transporter type 1, transmembrane domain 7 334 IPR036640 GO:0005524|GO:0016020
Pte17g00413 346 PANTHER ABC TRANSPORTER B FAMILY 7 339 IPR039421 -
Pte17g00413 346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 21 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00413 Pte-Chr17 5403254 5405294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00413 8 338 Calmodulin-binding Proteins AT2G36910 33.234 1.45e-52 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00413 K05658 - gmx:100788127 540.036