Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00409 ATGAGACCAAAATTAGGTCAGCCCGCTGGCAGATCAAATGCTCCATCAATTCCTGCTTCAGAGAGTGATTCAGGTGCTCCCAAAACCAAGTTAAAACCATTTTTCTGGGATAAGGTTCAAGCTAGTCCTGATGAAGCAATGGTTTGGAATCAGATCAAAGCAGGATCATTTCATGAGGAAATGATAGAAAACCTGTTTGGTTATTCAGCTGCTGGTAATGGCAAGGTTAAAAACAAGAAACAACCATATTCTCAAGACTCTACACCACAGCTTATCCAACTCATCAATCCGAAAAAAGTACAAAATTTAGCAATTCTACTGAAAGCATTGAATGTGATGAATAAAAAAGTCTGTGATGCATTTCATGAAGGAAATGAACTCCCTGCAGAATTCATTCAGACATTGATAAGGATGGCACCTACAACAGACGAAGAACTTAAACTTAGGCTTTTCAATGGTGAAATGTCCTATCTTAGACCAGCTGACCGCTTTCTAAAATCTTTAGTGGACATTCCTTTCGCCTTCAAACGTATGGAAGCATTGCTTTTTATGGATACTCTTCGAGAAGAGCTTACCACTTATAAGGAATCATATGAAACCTTGGAGGTTGCTTATAAGGACCTGAGAAACAACAGATTATTCTTCAAACTTCTAGAAGCTGTTCTTAAAATTGGTAACCGCATTAATGATGGCACTTATCATGGCGAGGCTCAAGCATTTAAACTTGACACACTTCTGAAATTATCTGATGTAAAAGGAATAGATGGCAAGATCACACTCCTAAATTTTGTAGTTAAGGAGGTAATGCATAGCGAAGGTTTGAAAGTTCTTCGTATAGCAAAAGAGTGGGAGTTTCTCTAG 861 0.3821 MRPKLGQPAGRSNAPSIPASESDSGAPKTKLKPFFWDKVQASPDEAMVWNQIKAGSFHEEMIENLFGYSAAGNGKVKNKKQPYSQDSTPQLIQLINPKKVQNLAILLKALNVMNKKVCDAFHEGNELPAEFIQTLIRMAPTTDEELKLRLFNGEMSYLRPADRFLKSLVDIPFAFKRMEALLFMDTLREELTTYKESYETLEVAYKDLRNNRLFFKLLEAVLKIGNRINDGTYHGEAQAFKLDTLLKLSDVKGIDGKITLLNFVVKEVMHSEGLKVLRIAKEWEFL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00409 286 Gene3D Formin, FH2 domain 19 286 IPR042201 -
Pte17g00409 286 ProSiteProfiles Formin homology-2 (FH2) domain profile. 21 286 IPR015425 -
Pte17g00409 286 Coils Coil 184 211 - -
Pte17g00409 286 PANTHER FORMIN-RELATED 10 278 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte17g00409 286 MobiDBLite consensus disorder prediction 1 29 - -
Pte17g00409 286 SMART it6_source 21 285 IPR015425 -
Pte17g00409 286 Pfam Formin Homology 2 Domain 24 270 IPR015425 -
Pte17g00409 286 SUPERFAMILY Formin homology 2 domain (FH2 domain) 33 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00409 Pte-Chr17 5288951 5290732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00409 15 282 FH2 protein (formin) Gene Family AT5G54650 64.074 1.21e-116 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00409 - - jre:109014354 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00409 17 5288951 5290732 Pte17g00409 17 5288951 5290732 RCT