Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00408 ATGGTGGATAAGCATGCAGATAATATAAGGGGTACCTTTGGCTATCTTGATCCTGAGTATATATCTACTCGATCGTTCACCAAGAAGAGTGATGTGTACAGTTATGGAGTTTTGCTCTTTGAACTAATAGCTGGCAGAAATCCTCAGCAGGGTCTTCTGGAATATGTTGAGCTGGCAGCAATAAATGCCGACGGGAAAGTTAGGTGGGAAGAACTAGTGGATTCCCACCTTGATGGAAAATTCGATAATCAAGAGCTGAATGAAGTGGCAGCAATTGCTTTCAAATGCATCAACCGCTCCCCAAGGAAGCGGCCTTCCATGAGGGACATAGTGCAGGTGCTGACTCGAATTCTTAAACTGAAGCGCAACAGCAGTCTCCATAAAAAGACACTATCTGCTATGACAGATGAAGTTTCCGTAAATATTGAGCAGCTAGATGCAAAGATTGCAACCAATGAACATAGGAGAGAAGAATCTATTGATAGCAATGCTGATACCTTCGAAGTATAA 510 0.4255 MVDKHADNIRGTFGYLDPEYISTRSFTKKSDVYSYGVLLFELIAGRNPQQGLLEYVELAAINADGKVRWEELVDSHLDGKFDNQELNEVAAIAFKCINRSPRKRPSMRDIVQVLTRILKLKRNSSLHKKTLSAMTDEVSVNIEQLDAKIATNEHRREESIDSNADTFEV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00408 169 Pfam Protein kinase domain 6 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00408 169 PANTHER OS01G0253100 PROTEIN 8 122 - -
Pte17g00408 169 SUPERFAMILY Protein kinase-like (PK-like) 7 128 IPR011009 -
Pte17g00408 169 Gene3D Transferase(Phosphotransferase) domain 1 2 143 - -
Pte17g00408 169 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00408 Pte-Chr17 5271913 5272574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00408 9 120 Receptor kinase-like Gene Family AT4G02010 39.167 1.54e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte17g00408 Pkinase 8.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00408 - - qsu:112025008 264.233