Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00406 ATGAAGGAGGAGTCCATAGGGCTGATCATAGGGATCTCTATTGGTGTGGTGATTGGAATTGGTTTGGCGATATCTGCAATATTTTGCCATAAGTTCCACAGAAAACGTTCACAGATAGGTAATAGCAGTTCGAGGAGGGCAGCTACCATACCCATTCGCACAAATGGTGCTGATTCTTGTACCATACTTTCAGACTCAACAATAGATCCTGAATCACCTGTAAAGTCTGGTAGAAATGGCAGGTCTTGCTTTCATGGATTTAAGAAGAACAGCATCGTTTCAGCGTCAGGGATACCCGAGTATTCATACAAGGATTTACAAAAGGCTACATACAATTTTACAACATTGATTGGTCAAGGCGCTTTTGGTCCTGTGTACAAAGCGCTGATGTCAACTGGTGAAACTGTAGCTGTGAAAGTTCTTGCCACTGATTCAAAGCAAGGGGAGAAAGAATTCCAAACAGAGGTGATGCTATTGGGAAGGTTACATCACAGGAATCTTGTGAATCTGGTAGGATACTGTGCAGAGAAAGGGCAGAACATACTTGTATATGTCTACATGAGTAAAGGCAGCCTGGCTTCTCATCTATACAATCAGGGGAACGAGCCATTGAGTTGGGATTTGAGGGTCCAGATAGTTTTAGATGTAGCAAGGGGCTTGGAGTATCTGCATGACGGGGCCATTCCTCCTGTGATTCACCGTGACATAAAATCTTCCAATATATTGTTGGACCAGTCAATGAGAGCTCGGGTTGCTGATTTTGGCCTCTCAAGGGAGGAAATGGTGGATAAGCATGCAGATAATATAAGGGGTACCTTTGGCTATCTTGATCCTGAGTATATATCTACTCGATCGTTCACCAAGAAGAGTGATGTGTACAGTTATGGAGTTTTGCTCTTTGAACTAATAGCTGGCAGAAATCCTCAGCAGGGTCTTCTGGAATATGTTGAGCTGGCAGCAATAAATGCCGACGGGAAAGTTAGGTGGGAAGAACTACATCTTTCGTAG 1008 0.4355 MKEESIGLIIGISIGVVIGIGLAISAIFCHKFHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTIDPESPVKSGRNGRSCFHGFKKNSIVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKALMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQNILVYVYMSKGSLASHLYNQGNEPLSWDLRVQIVLDVARGLEYLHDGAIPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHADNIRGTFGYLDPEYISTRSFTKKSDVYSYGVLLFELIAGRNPQQGLLEYVELAAINADGKVRWEELHLS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00406 335 Gene3D Transferase(Phosphotransferase) domain 1 187 330 - -
Pte17g00406 335 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 85 186 - -
Pte17g00406 335 PANTHER OS01G0750732 PROTEIN 4 308 - -
Pte17g00406 335 SUPERFAMILY Protein kinase-like (PK-like) 92 326 IPR011009 -
Pte17g00406 335 Pfam Protein tyrosine and serine/threonine kinase 113 321 IPR001245 GO:0004672|GO:0006468
Pte17g00406 335 Gene3D Phosphorylase Kinase; domain 1 79 186 - -
Pte17g00406 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pte17g00406 335 SMART serkin_6 111 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00406 335 ProSiteProfiles Protein kinase domain profile. 111 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00406 Pte-Chr17 5248644 5252684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00406 97 319 Receptor kinase-like Gene Family AT3G19300 50.877 1.78e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte17g00406 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00406 - - mnt:21404023 558.91