Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00398 ATGACAATTCCGAAGAAGAACATTGTTGTTTCTGTCGTTTCCGTGATCCTTGTAATTGGTATTGCAATTGGTCTTGTGTTTGAAATTCAACATTTCCACCGACGCAACGATGTTGGCAATCGTGTGCAGCTCACGGCGCGAAATAACGCCGTCGTTGCACTGTGTAAGAAGACAGATGATCAAAAGCTCTGCCATGATACCCTTGATAATGTAAACAGCACTCACCCACGGGACTATATCAAGGCTGCAGTTCAAGCAACGATATACAATGTTATAAAATCATTGAACATATCTGATATGCTTGTGCTTCAAGCAACCCATAACCCCAGAACTAAAATGGCAATTGAGGACTGCAAGTACTTGCTGCAGTCTGCATTACGTGACCTCCAAGCAATTATTTTAGCTGAAGGTGGCAGAGTTGATCTTCAAACTCTGCAGGATCTTTCTTATGATTTCAAGGTCTGGTTGAGCGCTGTGATCTCGTACCAGCAAACTTGCATCGACGGGTTTGGAGAAGATGTAAAAATCGATCAGAAAATTTTCAAGGACATGCAAAATGGTGGTTTGCTTGATGCTGGCAAGACCACTAGCTTGGCACTTGCTGTTGTTGATGAAGTCTCCAAAATTCTCAAGTCCTTTGGTTTTGGAATTAAACCAAAGCCTACTCCTCGTCGTCTTCTTGGATATCCAACCTGGTTTTCTGCAACTGATCGTAAAATCCTTGCTACAAATGTCAATGAAGGAGTGACACCAAATGCAGTTGTAGCCAAAGATGGCAGTGGTCAATTTAAAAACGTTACTGCTGCCCTTGCTGCTATTCCTAACAACTATACAGACCGATATGTGATATACGTGAAGGCTGGAGTCTACAATGAGTATATCAGTGTTAAAAGTCCATATGTAACCATGTATGGTGATGGCCCTGATAAAACCATTGTCACTGGAAACAAGAGCAACAAAAAGGGCTGGTCTACTCTGGAGACTGCCACTTTTGTTGTCGAGGTAGATGGATTCATTGGCAAGGATATGCGGTTCCAAAATACAGCAGGGCCTGATGAAGGACAAGCAGTGGCACTAAGAGTCCAAGGAGATATGTCAGCTTTCTTCAACTGCAACATAGATGGCTATCAAGACACCTTGTGGGTTCAAGCAAAGCGTCAATTTTACCGTGACTGCAACATCTCTGGCACAATTGATTTCATCTTTGGTGACTCTTTTGCTCTTATTCAAAACTCTAAGATCATCGTTAAGAGGCCAGCTGATGGACAGTCCAACTTAATCACAGCACAAGGTAGAACAGATCCACACGAACCAACAGCAATTGTCATACACAAGTGTAAAATTGTTGCAGAGGACAATCTAATCAACGATAAGGTTAAATTCAAGAGCTACATGGGGAGGCCGTGGAAGCCATTAGCAACAACAATTGTTATGGAATCTAATCTGGGAAGTTTTCTTGACCCACAAGGATGGGCTCCTTGGAATGCAACCACCCCACCTGCTGACACCTTGTTTTTTGCTGAGTATGCCAATACTGGACCGGGTGCTAATGTTACAGCCAGGGTCAACTGGAAAGGGTTCAATGTCATCGACAAGCAATCTGTTTTGAGATTCAGTCCTGCATTTTTCCTCGAAAGAAGTAGCATCTGGTTGAAGAAAACTGGCATACCTGTCCATTACGAATTGTAA 1689 0.4287 MTIPKKNIVVSVVSVILVIGIAIGLVFEIQHFHRRNDVGNRVQLTARNNAVVALCKKTDDQKLCHDTLDNVNSTHPRDYIKAAVQATIYNVIKSLNISDMLVLQATHNPRTKMAIEDCKYLLQSALRDLQAIILAEGGRVDLQTLQDLSYDFKVWLSAVISYQQTCIDGFGEDVKIDQKIFKDMQNGGLLDAGKTTSLALAVVDEVSKILKSFGFGIKPKPTPRRLLGYPTWFSATDRKILATNVNEGVTPNAVVAKDGSGQFKNVTAALAAIPNNYTDRYVIYVKAGVYNEYISVKSPYVTMYGDGPDKTIVTGNKSNKKGWSTLETATFVVEVDGFIGKDMRFQNTAGPDEGQAVALRVQGDMSAFFNCNIDGYQDTLWVQAKRQFYRDCNISGTIDFIFGDSFALIQNSKIIVKRPADGQSNLITAQGRTDPHEPTAIVIHKCKIVAEDNLINDKVKFKSYMGRPWKPLATTIVMESNLGSFLDPQGWAPWNATTPPADTLFFAEYANTGPGANVTARVNWKGFNVIDKQSVLRFSPAFFLERSSIWLKKTGIPVHYEL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00398 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 204 IPR035513 -
Pte17g00398 562 Pfam Plant invertase/pectin methylesterase inhibitor 50 183 IPR006501 GO:0004857
Pte17g00398 562 NCBIfam pectinesterase inhibitor domain 45 180 IPR006501 GO:0004857
Pte17g00398 562 CDD PMEI-like_3 53 208 - -
Pte17g00398 562 Pfam Pectinesterase 252 545 IPR000070 GO:0030599|GO:0042545
Pte17g00398 562 Gene3D - 249 562 IPR012334 -
Pte17g00398 562 SMART PMEI_2 46 202 IPR006501 GO:0004857
Pte17g00398 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Pte17g00398 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 207 IPR035513 -
Pte17g00398 562 FunFam Pectinesterase 4 249 562 - -
Pte17g00398 562 PANTHER PECTINESTERASE 18 552 - -
Pte17g00398 562 SUPERFAMILY Pectin lyase-like 250 558 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00398 Pte-Chr17 5148797 5150889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00398 5 557 Carbohydrate Esterase AT5G49180 39.859 3.38e-131 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00398 K01051 - tcc:18613795 539.265