Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte17g00397 | ATGAAATTATCAGCTGAATCGAGTTCATGTTCGAGTCTAAAGAAAAACATGCGATCGGGTTTGAGACTTCGGAAGAAGCACAAAAGGCTTGATGCGATATATGAGAGAGAGTATAATAGAAACCATGGGGAGTTGAATGAGGACGATGTTGGTGGAATTATGAGTAAGAATGATGAAATGGACGTTCGCAGGAGCTCGCGAGTTAGAAGAGCGCCTGTATTGCTTGATGCATCTCCATCTCTCCCAAAGAAGCGGAGGAAGCTTGTGAAGAATGTGAAACTGAGTTGTGGAAAGAATGTGGCAAGTCCAGTGAATGTGAATCAGAAGCCTGCTAATGTGGAAAGTGCTGGAACTTGGTCACCAAGGCTGAGGGCAAGGGGTAGGCGTGTCGGTTTTACGGTGAAGGAGGAGAAAGATTTTCCAAGCTGGAAAAGGAGGCAGGATGCAGGTGAAAATTTGGATGATCAGAAAATGGAAGCTGCAGTGGATAGGAGAAAGGAAGAATTAGATGAGGTAATGACTACAGTTGTAAAGTCAAAGAGACCAGGGAGGGTTAAAGCCACAAAGCATTTAGGGGAAGGGCAAAATGCTAATAGTTCAAATATGAATTTCGAACAGAGTGTAATAGAAGTAAAGCTTTCCAGGAATGAGGACCAAGAGACTGGTTCTGTTTCGGAAGTTGAATTGGTCGATAGAGATTCAATAGAAATAGTGAACGATGAGGCCACTCCAACTATGGATAGAGAAGGTAGAGAAATATCAACCAGTATACAATTAGAAGAAGTTGTTGCAAATGAAAACATTGAGAATTTAGAAGGCAATGAAAAAAAAGTAGAAGGATCTGGTTGTGCGAATGAAGATGAAAAAAGAAATGGTGTCACAGGTATTGTTGGGGTTTCTGGTAATCAATTAGACAATGATGTGCATCTTGATGATGGAGAGGACGTCAATGAAGGAAAGACCTTGCAAGAGAAAGACATTACCAAAATGGATAAGCCCAAATATCTTTTAGATAGCATGCCTGGTGGAGCGAGGATTAAAGAGGGTAGACATTGTGGTTTGTGTGGGGGAGGAACTGATGGTAAACCACCAAAGAAGTTTGTTGATGAAAATGGCGAAAGTGAGAATGACGCATATAGTGGTTCTTCTGCTTCAGATGAACATAATTATGATATTTGGGATGGCTTTGGAGATGAACCCGGCTGGCTTGGACGTCTTTTAGGACCTATTAATGATCGTTATGGTATTGCTGGAATATGGGTGCATCAACACTGTGCTGTGTGGAGTCCAGAGGTTTATTTTGCTGGTTTAGGATGCTTAAAGAATGTAAGGGCTGCTCTTTGCAGGGGCAGAGCACTGAAGTGCACAAGATGTGGCAGGCGAGGAGCCACCATTGGATGCCGTGTTGATCGTTGTCCAAAAACATATCACTTGCCATGTGCACGGGCTAATGGATGCATCTTTGATCATCATAAATTTCTTATAGCCTGCACAGATCACAGGCATCTCTTCCAACCTCTTGGAAATAAATACTTAGCTCAGATAAAGAGACTGAAGGCTAGGAAAATGAAATTGGAACTCAGGAAGCTGTCAAATGATGCATCAAGGAAGGATGTTGAAGTAGAAGAAAAATGGTTGGAGAACTACGGCGAGGATGAAGAATTTTTGAAACGTGAAAGCAAGAGGCTACACCGTGATCTTTTGAGAATTGCCCCTGAATATATTGGTGGACCAGAATCTGAAAACAAAGACAAGTTTCAGGGTTGGGAATCTGTTGCTGGCCTTAAAGATGTCATTCAGTGCATGAAAGAAGTTGTCATATTGCCTCTGCTGTATCCTGAGTTTTTTGACAGCATGGGACTCACTCCTCCCAGAGGTGTTCTTTTGCATGGGTATCCAGGAACTGGGAAAACTCTAGTGGTGCGAGCACTGATTGGTGCATGTGCCCGTGGTGACAGAAGGATATCTTATTTTGCTCGGAAAGGTGCAGATTGCTTGGGAAAGTATGTTGGTGATGCTGAGCGTCAATTGAGACTATTATTTCAGGTCGCTGAGAAATGTCAGCCTTCAATAATATTCTTTGACGAGATAGATGGTTTAGCACCCTCAAGAACAAGAAATCAAGATCAAACACATAACTCAGTTGTTTCAACATTGCTTGCTTTATTAGATGGTTTGAAATCTCGAGGTTCTGTTGTGGTTATTGGAGCAACAAATCGACCAGATGCTGTTGATCCTGCACTTCGGCGGCCTGGACGATTTGATCGGGAGATATATTTTCCACTGCCCTCGGTCGACGATAGAGCTGCCATTCTCTCACTTCACACGCAGAAATGGCCAAAACCAATTACTTGGCCTTTGCTTGAGTGGATTGCTAGAAGAACTGCTGGATTTGCTGGTGCTGATCTTCAGGCTCTCTGTACCCAAGCTGCAATTAATGCTTTGAAGAGGATTTTCCCTTTGCATGAAGTACTGTCTTCTGCAGTAGATAATGTTCATAAGCACCTTCCTCTTCCAACCTTTTCTGTGGAGGAGAGGGATTGGTTGGAGGCTATGTTGAGTTCTCCTCCTCCATGTTCTCGCAGAGAAGCTGGAAATGCTGTTAATGATGTACAATGCTCTTCTCTGCAGATCCACCTCTTGCCTTGCCTTCTTCGACCATTGTGCAACCTTCTGATATCTCTCTATCTTGATGACCGGCTTTCATTGCCTCCTTCAATAATGAAAGCTGCATTGACAATTAAAAGTAGGATTGTTTCTCTGTTGGATAAAAAGAAAATGCCCCTTGGTCAATGGTGGTTACACGTTGATGATTTCCTTCAAAGAGAAGACATTGCGACTGAAATAAGTGCTAAACTCATACATTTAAGCGTCATTGTAGATGATAGCACTGGTGGTTCTCGTGCTTTTCTAGATGATGTTGATTATGTCTATATCAACCTGGAACCTTTTGAAAAACGCTACGTTATCCACCAAACTTGCTTATTACAAACCACATCTTCTGCTTTGACTGACAAAGCAGGGTTTCAGGTACTAATTGCTGGACATTCAAAATCTGGCCAGAGACATCTTGCTTCTTGCCTTCTTAACTGCTTTGTTGGGAATGTTGAAATTCAAAAAGTAGATGCTGCTACAATATCACAAGCAGGCCGTGGAGATATGGTGCAAGGGATTGCACAATTGCTAATAAGATGCAATAGTGTGAGATCGTGCCTGATATTCATGCCAAGAATTGACTTATGGGCGATTGAGACGAATAGTGAAATTGCCAATGAGAAAGAGTCTTATGTCACCCACATCCAAAATATTGAGCAGGAAAATGGATCCTATGCTGGGAAAAAGAACATTACAGAGCCTAGAAAGGACCAAGAAGACCACAGGACTGCTTCATACAGCTGGATCTCTTTCATTGAGCAGTTTGAGTCTATTGGTGTCAAAACATCCTTGATGGTTTTGGCTACTTCAGAAGTTCCATTTCCTGAACTTCCACGTAGAGTGAGGGAGTTCTTTAAGCATGATGAATCAACTGGCAACAGCTTGACTACTTCAAATTACAAAGTCCCTTGTTTCACAGTGCAGATAGATGAGAATTTTGATCGTGATATGGTGATCAACTTTTCAGCATCAGAGCTGTCAAGGGACATAGTTAAGCAAATGGTTCAGGTGATTCATCAGAGAACTCACATTCAAAATAGTCTTTGCAAGGAGTATATCACTGATTCAATGGAAGCTGACATAGGTCAAGTCCGCAAGGAAATAAATGATTGCTCAGCAAATGGATACAAGGATAGAATGCAGTGTCCTGGTGAAACTCTTACCAAAATTTCCCAACAACCTAGCAGCAAAAACTTGAAGGGGAAGACAAACCTTTTATTAGCAATAGCTTCCTTTGGCTACCAAATTCTTCTGTATCCTCATTTTGCCGAACTCTGCTGGATCACATCAAAGTTGAATGAAGGTCCTTGTGCTGATGCAAGTGGACCTTGGAAAGGTTGGCCTTTCAATTCTTGTATTGTGCGTCCAAATAAAGTAGATAGGGCACCTGCTTCTTGTGGAACTGGAAATATGAAAACCAAAGAGAAATCTGGTTTTGTTAGAGGCCTTGTGGCAGTTGGTTTATCAGCATATAGAGGTGTCTATACATCTGTCAAGGAAGTCTCCGTTGAGATCAGGAAGGTTCTTGAGCTCTTAGTGGAGGAAATTAACACAAGAATCCAAGGTGGAAACGAAAGGCATCAATATATCCGTGTTGTATCGCAAGTTGCTTACCTGGAAGATTTGGTGAATAGCTGGGCCTATGGATTGCTAAGTCTAGAACCTGATTCAACAGGAATAGAAGCAAAGCATTTGCCAAATTCTGAAGCATCTCTAAATTATAACAAGTCGTGTGAAGATAATCAAGTTGAGCTTGAAGGTTGCCAGTTAACTATTCCTGTGGAGAGGCCTCTTGATTCAATGATGCTGAAGGATACTTCTCAAGAAATCAACACACAAGAACCTGAATGTTGTGACTTGCATAATAAAAGTGATCATTTGATAGATCGAGTAATAAACTCTCAGAATGAACGAAGTGACAGTTCGACGGCAAAACAGTTAACTGGCGAAGTTCCGGGTGACAAAAAGATTACCAGTTTTGTTGCTACAAAACCATTCAATGATGAATTTCAGAATGAAGTGAACGGGGAGATTTCTGTATCATTCAAGTCTCAAGATTCTGAAAATCAAGTTGTGGATAAAGATCTTAGGCCTTCAAACAAATCTAAGGGTTTTGCAAATTATAAAGAGACCTTCCTTGACAAAGACGACCTCCATGTTTCATGTGAAATTGAGTCTGCTCAATTTGGTAATTCCACGGGGATGTCCAACCAGGTTTGCAGCGTGCCCTTGTTAGAGAAGGGTATTGAAGGAAGTAATGTTAACTCTGATGCCAATGAAAATGCTGTTAACATTTTATCAGACAGAACGGATGAGCCTGCAGAATCAGGAGCGCTATGTATGTATCAATGTTGCCCTGAATGTCTTCGGAGCCTATATGGATTGATTCAGAAAATTCTCACTACAAAAATGGGGATGCATGGGAGCCATTGGACTGCAGAGGAAATCCACCATGTTGTGACATCGTCATCAATCAACCTTTCTTCAGCAGTTAGAAAAGCTTGTCTGGCAGGAGATTTGAGCGAAATTTCTGCTGTAGATTTGAAATGCAGTAAGCAAGGAACTAAGTTTCCTGTTTCAAGAACGAATGAGCTTGAATTCTCTAGAAGAGTGACAGCCCCTGCTGAATGTACCCTCCATTCCATAACGTTGGACAGGACCGCAAAAAATATACAACTCCAGCTTGATTCAAAATTTATATTCAGAGATGGCGTACTGGTTCACTTAGATGTAGACAAGGACGCAAGTTTCCACTGTAAATTCGAAACCCTTTGCCTCTGTTCTCTTATAGAGTTGATAGAATTGACGAAGCACCCTTTTGATTGA | 5481 | 0.4163 | MKLSAESSSCSSLKKNMRSGLRLRKKHKRLDAIYEREYNRNHGELNEDDVGGIMSKNDEMDVRRSSRVRRAPVLLDASPSLPKKRRKLVKNVKLSCGKNVASPVNVNQKPANVESAGTWSPRLRARGRRVGFTVKEEKDFPSWKRRQDAGENLDDQKMEAAVDRRKEELDEVMTTVVKSKRPGRVKATKHLGEGQNANSSNMNFEQSVIEVKLSRNEDQETGSVSEVELVDRDSIEIVNDEATPTMDREGREISTSIQLEEVVANENIENLEGNEKKVEGSGCANEDEKRNGVTGIVGVSGNQLDNDVHLDDGEDVNEGKTLQEKDITKMDKPKYLLDSMPGGARIKEGRHCGLCGGGTDGKPPKKFVDENGESENDAYSGSSASDEHNYDIWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHHKFLIACTDHRHLFQPLGNKYLAQIKRLKARKMKLELRKLSNDASRKDVEVEEKWLENYGEDEEFLKRESKRLHRDLLRIAPEYIGGPESENKDKFQGWESVAGLKDVIQCMKEVVILPLLYPEFFDSMGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRISYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRNQDQTHNSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSVDDRAAILSLHTQKWPKPITWPLLEWIARRTAGFAGADLQALCTQAAINALKRIFPLHEVLSSAVDNVHKHLPLPTFSVEERDWLEAMLSSPPPCSRREAGNAVNDVQCSSLQIHLLPCLLRPLCNLLISLYLDDRLSLPPSIMKAALTIKSRIVSLLDKKKMPLGQWWLHVDDFLQREDIATEISAKLIHLSVIVDDSTGGSRAFLDDVDYVYINLEPFEKRYVIHQTCLLQTTSSALTDKAGFQVLIAGHSKSGQRHLASCLLNCFVGNVEIQKVDAATISQAGRGDMVQGIAQLLIRCNSVRSCLIFMPRIDLWAIETNSEIANEKESYVTHIQNIEQENGSYAGKKNITEPRKDQEDHRTASYSWISFIEQFESIGVKTSLMVLATSEVPFPELPRRVREFFKHDESTGNSLTTSNYKVPCFTVQIDENFDRDMVINFSASELSRDIVKQMVQVIHQRTHIQNSLCKEYITDSMEADIGQVRKEINDCSANGYKDRMQCPGETLTKISQQPSSKNLKGKTNLLLAIASFGYQILLYPHFAELCWITSKLNEGPCADASGPWKGWPFNSCIVRPNKVDRAPASCGTGNMKTKEKSGFVRGLVAVGLSAYRGVYTSVKEVSVEIRKVLELLVEEINTRIQGGNERHQYIRVVSQVAYLEDLVNSWAYGLLSLEPDSTGIEAKHLPNSEASLNYNKSCEDNQVELEGCQLTIPVERPLDSMMLKDTSQEINTQEPECCDLHNKSDHLIDRVINSQNERSDSSTAKQLTGEVPGDKKITSFVATKPFNDEFQNEVNGEISVSFKSQDSENQVVDKDLRPSNKSKGFANYKETFLDKDDLHVSCEIESAQFGNSTGMSNQVCSVPLLEKGIEGSNVNSDANENAVNILSDRTDEPAESGALCMYQCCPECLRSLYGLIQKILTTKMGMHGSHWTAEEIHHVVTSSSINLSSAVRKACLAGDLSEISAVDLKCSKQGTKFPVSRTNELEFSRRVTAPAECTLHSITLDRTAKNIQLQLDSKFIFRDGVLVHLDVDKDASFHCKFETLCLCSLIELIELTKHPFD* | 1827 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte17g00397 | 1826 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 589 | 821 | IPR027417 | - | |
Pte17g00397 | 1826 | Pfam | PHD-like zinc-binding domain | 422 | 501 | - | - | |
Pte17g00397 | 1826 | SMART | AAA_5 | 623 | 764 | IPR003593 | GO:0016887 | |
Pte17g00397 | 1826 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Pte17g00397 | 1826 | Gene3D | - | 763 | 853 | - | - | |
Pte17g00397 | 1826 | FunFam | ATPase family, AAA domain-containing 2 | 586 | 769 | - | - | |
Pte17g00397 | 1826 | PANTHER | AAA DOMAIN-CONTAINING | 19 | 1721 | IPR045199 | - | |
Pte17g00397 | 1826 | Pfam | AAA+ lid domain | 788 | 820 | IPR041569 | - | |
Pte17g00397 | 1826 | Pfam | ATPase family associated with various cellular activities (AAA) | 627 | 762 | IPR003959 | GO:0005524|GO:0016887 | |
Pte17g00397 | 1826 | Gene3D | - | 588 | 861 | IPR027417 | - | |
Pte17g00397 | 1826 | FunFam | p-loop containing nucleoside triphosphate hydrolase superfamily protein | 763 | 853 | - | - | |
Pte17g00397 | 1826 | FunFam | P-loop containing nucleoside triphosphate hydrolases superfamily protein | 347 | 503 | - | - | |
Pte17g00397 | 1826 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 400 | 503 | IPR013083 | - | |
Pte17g00397 | 1826 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 349 | 501 | IPR034732 | - | |
Pte17g00397 | 1826 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Pte17g00397 | 1826 | ProSitePatterns | AAA-protein family signature. | 732 | 750 | IPR003960 | GO:0005524|GO:0016887 | |
Pte17g00397 | 1826 | Coils | Coil | 508 | 528 | - | - | |
Pte17g00397 | 1826 | MobiDBLite | consensus disorder prediction | 363 | 385 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte17g00397 | Pte-Chr17 | 5137796 | 5145620 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte17g00397 | 589 | 824 | Calmodulin-binding Proteins | AT3G56690 | 42.017 | 5.51e-45 | 176 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte17g00397 | - | - | qsa:O6P43_029140 | 2004.56 |