Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00397 ATGAAATTATCAGCTGAATCGAGTTCATGTTCGAGTCTAAAGAAAAACATGCGATCGGGTTTGAGACTTCGGAAGAAGCACAAAAGGCTTGATGCGATATATGAGAGAGAGTATAATAGAAACCATGGGGAGTTGAATGAGGACGATGTTGGTGGAATTATGAGTAAGAATGATGAAATGGACGTTCGCAGGAGCTCGCGAGTTAGAAGAGCGCCTGTATTGCTTGATGCATCTCCATCTCTCCCAAAGAAGCGGAGGAAGCTTGTGAAGAATGTGAAACTGAGTTGTGGAAAGAATGTGGCAAGTCCAGTGAATGTGAATCAGAAGCCTGCTAATGTGGAAAGTGCTGGAACTTGGTCACCAAGGCTGAGGGCAAGGGGTAGGCGTGTCGGTTTTACGGTGAAGGAGGAGAAAGATTTTCCAAGCTGGAAAAGGAGGCAGGATGCAGGTGAAAATTTGGATGATCAGAAAATGGAAGCTGCAGTGGATAGGAGAAAGGAAGAATTAGATGAGGTAATGACTACAGTTGTAAAGTCAAAGAGACCAGGGAGGGTTAAAGCCACAAAGCATTTAGGGGAAGGGCAAAATGCTAATAGTTCAAATATGAATTTCGAACAGAGTGTAATAGAAGTAAAGCTTTCCAGGAATGAGGACCAAGAGACTGGTTCTGTTTCGGAAGTTGAATTGGTCGATAGAGATTCAATAGAAATAGTGAACGATGAGGCCACTCCAACTATGGATAGAGAAGGTAGAGAAATATCAACCAGTATACAATTAGAAGAAGTTGTTGCAAATGAAAACATTGAGAATTTAGAAGGCAATGAAAAAAAAGTAGAAGGATCTGGTTGTGCGAATGAAGATGAAAAAAGAAATGGTGTCACAGGTATTGTTGGGGTTTCTGGTAATCAATTAGACAATGATGTGCATCTTGATGATGGAGAGGACGTCAATGAAGGAAAGACCTTGCAAGAGAAAGACATTACCAAAATGGATAAGCCCAAATATCTTTTAGATAGCATGCCTGGTGGAGCGAGGATTAAAGAGGGTAGACATTGTGGTTTGTGTGGGGGAGGAACTGATGGTAAACCACCAAAGAAGTTTGTTGATGAAAATGGCGAAAGTGAGAATGACGCATATAGTGGTTCTTCTGCTTCAGATGAACATAATTATGATATTTGGGATGGCTTTGGAGATGAACCCGGCTGGCTTGGACGTCTTTTAGGACCTATTAATGATCGTTATGGTATTGCTGGAATATGGGTGCATCAACACTGTGCTGTGTGGAGTCCAGAGGTTTATTTTGCTGGTTTAGGATGCTTAAAGAATGTAAGGGCTGCTCTTTGCAGGGGCAGAGCACTGAAGTGCACAAGATGTGGCAGGCGAGGAGCCACCATTGGATGCCGTGTTGATCGTTGTCCAAAAACATATCACTTGCCATGTGCACGGGCTAATGGATGCATCTTTGATCATCATAAATTTCTTATAGCCTGCACAGATCACAGGCATCTCTTCCAACCTCTTGGAAATAAATACTTAGCTCAGATAAAGAGACTGAAGGCTAGGAAAATGAAATTGGAACTCAGGAAGCTGTCAAATGATGCATCAAGGAAGGATGTTGAAGTAGAAGAAAAATGGTTGGAGAACTACGGCGAGGATGAAGAATTTTTGAAACGTGAAAGCAAGAGGCTACACCGTGATCTTTTGAGAATTGCCCCTGAATATATTGGTGGACCAGAATCTGAAAACAAAGACAAGTTTCAGGGTTGGGAATCTGTTGCTGGCCTTAAAGATGTCATTCAGTGCATGAAAGAAGTTGTCATATTGCCTCTGCTGTATCCTGAGTTTTTTGACAGCATGGGACTCACTCCTCCCAGAGGTGTTCTTTTGCATGGGTATCCAGGAACTGGGAAAACTCTAGTGGTGCGAGCACTGATTGGTGCATGTGCCCGTGGTGACAGAAGGATATCTTATTTTGCTCGGAAAGGTGCAGATTGCTTGGGAAAGTATGTTGGTGATGCTGAGCGTCAATTGAGACTATTATTTCAGGTCGCTGAGAAATGTCAGCCTTCAATAATATTCTTTGACGAGATAGATGGTTTAGCACCCTCAAGAACAAGAAATCAAGATCAAACACATAACTCAGTTGTTTCAACATTGCTTGCTTTATTAGATGGTTTGAAATCTCGAGGTTCTGTTGTGGTTATTGGAGCAACAAATCGACCAGATGCTGTTGATCCTGCACTTCGGCGGCCTGGACGATTTGATCGGGAGATATATTTTCCACTGCCCTCGGTCGACGATAGAGCTGCCATTCTCTCACTTCACACGCAGAAATGGCCAAAACCAATTACTTGGCCTTTGCTTGAGTGGATTGCTAGAAGAACTGCTGGATTTGCTGGTGCTGATCTTCAGGCTCTCTGTACCCAAGCTGCAATTAATGCTTTGAAGAGGATTTTCCCTTTGCATGAAGTACTGTCTTCTGCAGTAGATAATGTTCATAAGCACCTTCCTCTTCCAACCTTTTCTGTGGAGGAGAGGGATTGGTTGGAGGCTATGTTGAGTTCTCCTCCTCCATGTTCTCGCAGAGAAGCTGGAAATGCTGTTAATGATGTACAATGCTCTTCTCTGCAGATCCACCTCTTGCCTTGCCTTCTTCGACCATTGTGCAACCTTCTGATATCTCTCTATCTTGATGACCGGCTTTCATTGCCTCCTTCAATAATGAAAGCTGCATTGACAATTAAAAGTAGGATTGTTTCTCTGTTGGATAAAAAGAAAATGCCCCTTGGTCAATGGTGGTTACACGTTGATGATTTCCTTCAAAGAGAAGACATTGCGACTGAAATAAGTGCTAAACTCATACATTTAAGCGTCATTGTAGATGATAGCACTGGTGGTTCTCGTGCTTTTCTAGATGATGTTGATTATGTCTATATCAACCTGGAACCTTTTGAAAAACGCTACGTTATCCACCAAACTTGCTTATTACAAACCACATCTTCTGCTTTGACTGACAAAGCAGGGTTTCAGGTACTAATTGCTGGACATTCAAAATCTGGCCAGAGACATCTTGCTTCTTGCCTTCTTAACTGCTTTGTTGGGAATGTTGAAATTCAAAAAGTAGATGCTGCTACAATATCACAAGCAGGCCGTGGAGATATGGTGCAAGGGATTGCACAATTGCTAATAAGATGCAATAGTGTGAGATCGTGCCTGATATTCATGCCAAGAATTGACTTATGGGCGATTGAGACGAATAGTGAAATTGCCAATGAGAAAGAGTCTTATGTCACCCACATCCAAAATATTGAGCAGGAAAATGGATCCTATGCTGGGAAAAAGAACATTACAGAGCCTAGAAAGGACCAAGAAGACCACAGGACTGCTTCATACAGCTGGATCTCTTTCATTGAGCAGTTTGAGTCTATTGGTGTCAAAACATCCTTGATGGTTTTGGCTACTTCAGAAGTTCCATTTCCTGAACTTCCACGTAGAGTGAGGGAGTTCTTTAAGCATGATGAATCAACTGGCAACAGCTTGACTACTTCAAATTACAAAGTCCCTTGTTTCACAGTGCAGATAGATGAGAATTTTGATCGTGATATGGTGATCAACTTTTCAGCATCAGAGCTGTCAAGGGACATAGTTAAGCAAATGGTTCAGGTGATTCATCAGAGAACTCACATTCAAAATAGTCTTTGCAAGGAGTATATCACTGATTCAATGGAAGCTGACATAGGTCAAGTCCGCAAGGAAATAAATGATTGCTCAGCAAATGGATACAAGGATAGAATGCAGTGTCCTGGTGAAACTCTTACCAAAATTTCCCAACAACCTAGCAGCAAAAACTTGAAGGGGAAGACAAACCTTTTATTAGCAATAGCTTCCTTTGGCTACCAAATTCTTCTGTATCCTCATTTTGCCGAACTCTGCTGGATCACATCAAAGTTGAATGAAGGTCCTTGTGCTGATGCAAGTGGACCTTGGAAAGGTTGGCCTTTCAATTCTTGTATTGTGCGTCCAAATAAAGTAGATAGGGCACCTGCTTCTTGTGGAACTGGAAATATGAAAACCAAAGAGAAATCTGGTTTTGTTAGAGGCCTTGTGGCAGTTGGTTTATCAGCATATAGAGGTGTCTATACATCTGTCAAGGAAGTCTCCGTTGAGATCAGGAAGGTTCTTGAGCTCTTAGTGGAGGAAATTAACACAAGAATCCAAGGTGGAAACGAAAGGCATCAATATATCCGTGTTGTATCGCAAGTTGCTTACCTGGAAGATTTGGTGAATAGCTGGGCCTATGGATTGCTAAGTCTAGAACCTGATTCAACAGGAATAGAAGCAAAGCATTTGCCAAATTCTGAAGCATCTCTAAATTATAACAAGTCGTGTGAAGATAATCAAGTTGAGCTTGAAGGTTGCCAGTTAACTATTCCTGTGGAGAGGCCTCTTGATTCAATGATGCTGAAGGATACTTCTCAAGAAATCAACACACAAGAACCTGAATGTTGTGACTTGCATAATAAAAGTGATCATTTGATAGATCGAGTAATAAACTCTCAGAATGAACGAAGTGACAGTTCGACGGCAAAACAGTTAACTGGCGAAGTTCCGGGTGACAAAAAGATTACCAGTTTTGTTGCTACAAAACCATTCAATGATGAATTTCAGAATGAAGTGAACGGGGAGATTTCTGTATCATTCAAGTCTCAAGATTCTGAAAATCAAGTTGTGGATAAAGATCTTAGGCCTTCAAACAAATCTAAGGGTTTTGCAAATTATAAAGAGACCTTCCTTGACAAAGACGACCTCCATGTTTCATGTGAAATTGAGTCTGCTCAATTTGGTAATTCCACGGGGATGTCCAACCAGGTTTGCAGCGTGCCCTTGTTAGAGAAGGGTATTGAAGGAAGTAATGTTAACTCTGATGCCAATGAAAATGCTGTTAACATTTTATCAGACAGAACGGATGAGCCTGCAGAATCAGGAGCGCTATGTATGTATCAATGTTGCCCTGAATGTCTTCGGAGCCTATATGGATTGATTCAGAAAATTCTCACTACAAAAATGGGGATGCATGGGAGCCATTGGACTGCAGAGGAAATCCACCATGTTGTGACATCGTCATCAATCAACCTTTCTTCAGCAGTTAGAAAAGCTTGTCTGGCAGGAGATTTGAGCGAAATTTCTGCTGTAGATTTGAAATGCAGTAAGCAAGGAACTAAGTTTCCTGTTTCAAGAACGAATGAGCTTGAATTCTCTAGAAGAGTGACAGCCCCTGCTGAATGTACCCTCCATTCCATAACGTTGGACAGGACCGCAAAAAATATACAACTCCAGCTTGATTCAAAATTTATATTCAGAGATGGCGTACTGGTTCACTTAGATGTAGACAAGGACGCAAGTTTCCACTGTAAATTCGAAACCCTTTGCCTCTGTTCTCTTATAGAGTTGATAGAATTGACGAAGCACCCTTTTGATTGA 5481 0.4163 MKLSAESSSCSSLKKNMRSGLRLRKKHKRLDAIYEREYNRNHGELNEDDVGGIMSKNDEMDVRRSSRVRRAPVLLDASPSLPKKRRKLVKNVKLSCGKNVASPVNVNQKPANVESAGTWSPRLRARGRRVGFTVKEEKDFPSWKRRQDAGENLDDQKMEAAVDRRKEELDEVMTTVVKSKRPGRVKATKHLGEGQNANSSNMNFEQSVIEVKLSRNEDQETGSVSEVELVDRDSIEIVNDEATPTMDREGREISTSIQLEEVVANENIENLEGNEKKVEGSGCANEDEKRNGVTGIVGVSGNQLDNDVHLDDGEDVNEGKTLQEKDITKMDKPKYLLDSMPGGARIKEGRHCGLCGGGTDGKPPKKFVDENGESENDAYSGSSASDEHNYDIWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHHKFLIACTDHRHLFQPLGNKYLAQIKRLKARKMKLELRKLSNDASRKDVEVEEKWLENYGEDEEFLKRESKRLHRDLLRIAPEYIGGPESENKDKFQGWESVAGLKDVIQCMKEVVILPLLYPEFFDSMGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRISYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRNQDQTHNSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSVDDRAAILSLHTQKWPKPITWPLLEWIARRTAGFAGADLQALCTQAAINALKRIFPLHEVLSSAVDNVHKHLPLPTFSVEERDWLEAMLSSPPPCSRREAGNAVNDVQCSSLQIHLLPCLLRPLCNLLISLYLDDRLSLPPSIMKAALTIKSRIVSLLDKKKMPLGQWWLHVDDFLQREDIATEISAKLIHLSVIVDDSTGGSRAFLDDVDYVYINLEPFEKRYVIHQTCLLQTTSSALTDKAGFQVLIAGHSKSGQRHLASCLLNCFVGNVEIQKVDAATISQAGRGDMVQGIAQLLIRCNSVRSCLIFMPRIDLWAIETNSEIANEKESYVTHIQNIEQENGSYAGKKNITEPRKDQEDHRTASYSWISFIEQFESIGVKTSLMVLATSEVPFPELPRRVREFFKHDESTGNSLTTSNYKVPCFTVQIDENFDRDMVINFSASELSRDIVKQMVQVIHQRTHIQNSLCKEYITDSMEADIGQVRKEINDCSANGYKDRMQCPGETLTKISQQPSSKNLKGKTNLLLAIASFGYQILLYPHFAELCWITSKLNEGPCADASGPWKGWPFNSCIVRPNKVDRAPASCGTGNMKTKEKSGFVRGLVAVGLSAYRGVYTSVKEVSVEIRKVLELLVEEINTRIQGGNERHQYIRVVSQVAYLEDLVNSWAYGLLSLEPDSTGIEAKHLPNSEASLNYNKSCEDNQVELEGCQLTIPVERPLDSMMLKDTSQEINTQEPECCDLHNKSDHLIDRVINSQNERSDSSTAKQLTGEVPGDKKITSFVATKPFNDEFQNEVNGEISVSFKSQDSENQVVDKDLRPSNKSKGFANYKETFLDKDDLHVSCEIESAQFGNSTGMSNQVCSVPLLEKGIEGSNVNSDANENAVNILSDRTDEPAESGALCMYQCCPECLRSLYGLIQKILTTKMGMHGSHWTAEEIHHVVTSSSINLSSAVRKACLAGDLSEISAVDLKCSKQGTKFPVSRTNELEFSRRVTAPAECTLHSITLDRTAKNIQLQLDSKFIFRDGVLVHLDVDKDASFHCKFETLCLCSLIELIELTKHPFD* 1827
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00397 1826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 821 IPR027417 -
Pte17g00397 1826 Pfam PHD-like zinc-binding domain 422 501 - -
Pte17g00397 1826 SMART AAA_5 623 764 IPR003593 GO:0016887
Pte17g00397 1826 MobiDBLite consensus disorder prediction 1 22 - -
Pte17g00397 1826 Gene3D - 763 853 - -
Pte17g00397 1826 FunFam ATPase family, AAA domain-containing 2 586 769 - -
Pte17g00397 1826 PANTHER AAA DOMAIN-CONTAINING 19 1721 IPR045199 -
Pte17g00397 1826 Pfam AAA+ lid domain 788 820 IPR041569 -
Pte17g00397 1826 Pfam ATPase family associated with various cellular activities (AAA) 627 762 IPR003959 GO:0005524|GO:0016887
Pte17g00397 1826 Gene3D - 588 861 IPR027417 -
Pte17g00397 1826 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 763 853 - -
Pte17g00397 1826 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 347 503 - -
Pte17g00397 1826 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 400 503 IPR013083 -
Pte17g00397 1826 ProSiteProfiles Extended PHD (ePHD) domain profile. 349 501 IPR034732 -
Pte17g00397 1826 MobiDBLite consensus disorder prediction 1 16 - -
Pte17g00397 1826 ProSitePatterns AAA-protein family signature. 732 750 IPR003960 GO:0005524|GO:0016887
Pte17g00397 1826 Coils Coil 508 528 - -
Pte17g00397 1826 MobiDBLite consensus disorder prediction 363 385 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte17g00397 Pte-Chr17 5137796 5145620 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00397 589 824 Calmodulin-binding Proteins AT3G56690 42.017 5.51e-45 176
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00397 - - qsa:O6P43_029140 2004.56