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Gene search
Sequence information
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100
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pte17g00394
ATGGATTTCTTCTCCAACAAAATCCAGAAACACCAGCCAAAACACAACAAAAAGAGGTTAACACAAGACCAAGTGAGCATCCTAGAGAGAAACTTTGTCTCAGACAAGAGGCTTGAGCCAGAGAGGAAGCTACAGCTTGCTAATCAACTTGGTGTCCCTCCAAGACAAATAGCTATTTGGTATCAGAACAAACGAGCCAGGTGGAAGACCCAGAGTCTTGAGCTGGACTATGGTTCTCTTCAATTGAAGCTGGAGAATGCCATAGCTGAGAAGAGGAAGCTGGAGAAAGACGTTGAAAGGCTCAAGTTGGAGCTCAAGAAAGCTCAGGACATGTTGAAGGACAAGGACCCTAATGTTTCTTCATGTTGTTCAACATCTGGTTTTGAAGAAAGCAAGCAAGGAGTTTCCTGCTTGCAAGGAGATATGAATGCGTTGTGGGGTAATTGTGAGGTTTTGCAGCTTGAGGAGATCTATGCTTGTTTCATGGAAGCAAATAGATCAAGCTTTGATTAA
513
0.4327
MDFFSNKIQKHQPKHNKKRLTQDQVSILERNFVSDKRLEPERKLQLANQLGVPPRQIAIWYQNKRARWKTQSLELDYGSLQLKLENAIAEKRKLEKDVERLKLELKKAQDMLKDKDPNVSSCCSTSGFEESKQGVSCLQGDMNALWGNCEVLQLEEIYACFMEANRSSFD*
171
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pte17g00394
170
MobiDBLite
consensus disorder prediction
1
20
-
-
Pte17g00394
170
SUPERFAMILY
Homeodomain-like
13
79
IPR009057
-
Pte17g00394
170
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN
12
132
IPR045224
GO:0003700
Pte17g00394
170
CDD
homeodomain
14
72
IPR001356
GO:0003677
Pte17g00394
170
ProSiteProfiles
'Homeobox' domain profile.
11
71
IPR001356
GO:0003677
Pte17g00394
170
Coils
Coil
77
111
-
-
Pte17g00394
170
SMART
HOX_1
13
75
IPR001356
GO:0003677
Pte17g00394
170
PRINTS
Lambda-repressor HTH signature
42
51
IPR000047
GO:0003677
Pte17g00394
170
PRINTS
Lambda-repressor HTH signature
51
67
IPR000047
GO:0003677
Pte17g00394
170
Gene3D
-
13
76
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pte17g00394
Pte-Chr17
5119281
5120158
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pte17g00394
12
168
Homeobox Transcription Factor Family
AT5G53980
43.558
4.45e-35
118
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-other
Pte17g00394
Homeodomain
2.9e-15
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pte17g00394
-
-
qsa:O6P43_000999
208.764
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