Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00390 ATGGCTGATGCAGGAGGCCTTGCAGAGACTGCTGGATCTAGGTTTAGCTCATTACAACTTATTGGAAGAGGGTCGTTTGGTGATGTCTACAAAGGGTTTGATGCGGATCTTAATAAAGAAGTTGCTATTAAAGTAATCGATTTGGAAGAATCGGAGGACGATATTGAGGATATTCAGAAGGAAATCTCTGTACTTTCACAATGCCGGTCTCCATACATTACTGAATATTATGGTTCTTATCTCAACCAGACAAAACTATGGATAATAATGGAATTCATGGCCGGAGGTTCTGTTGCTGACATGCTCCAATCTGGTCCTCCACTTGATGAATCATCAATTGCTTGCATATTGCGTGACTTGCTGCATGCAATCGAGTACCTACACAATGAAGGGAAAATTCATAGAGATATCAAAGCTGCTAACATTTTATTAACTGAGAGTGGTGATGTCAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATTTCAAGGAGAAAGACATTTGTAGGGACGCCATTTTGGATGGCTCCAGAGGTTATTCAGAACTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCGCTTGGGATAACTGCAATTGAGATGGCAAAAGGTGAACCTCCACTTGCTGATCTCCACCCTATGAGAGTTCTTTTTATCATACCTCGGGAGAACCCGCCTCAGTTGGATGAGCACTTTTCTCGCCCCATGAAAGAATTTGTTTCCTTGTGTTTAAAGAAGAATCCAGCTGAGAGGCCAAGTGCCAAGGAACTTCTCAAGCATCGTTTTATCAGGAATGCCAGGAAGAGCCCAAAGCTTCTGGAGAGAATTAGGGAACGCCCGAAGTTCCCAATAATACAAGATGCAGGAACCCCTAGAAATGGTCAGAATGGGATGGGAGAGGCATCTGACACTGTGAAGGTGACGAGAGTGTTAAGAGGCGAAGAAACTGTTCGATCTAGTGGCCAGGGGGCACAGGTGAGAAATGCTGGATGGGACTTCAGCATTGGTGGATCACAGAGTACAGGAACTGTTAGAAGTGTTCCTCTACCACCCCAAGTTAGAGAGAAGAGAAATGAAGTTACGAATAATCAGGCTAATCAAAGAAAAGCTCAAGAGAATAGTTATCGAGCAGCGTCCATATATAAAAGTGTACATCATGGGTCACCTGAAGCTTCCTTAATGAAAGATGCTGGAGATGCCTTCCATGGTCAGCACCATGATATTCATCATGAAAATGATGAGTTGACTGGAAATGCATCAGGGACTATTGTTATTCGCTCTCCGAAAGGACCACAGTCCCCTCTGGCCCATGAGCACAGCACCCTATCTGGCAGCAATTATGCTTCTTTTGAAGAAGATTCTTGCAGTGGAACTGTTGTTCTTCGTGATCCACATGATGATTCTGACTCTCCTCGGACTCCAAAATCCAGGTTGGGAATTCAGGAGAGAACTTCAAATTCATCGTTAGAAGACAGTGCAATGAATCTCGCGGAGGCAAAAGCTGCATTTAGAGGAGGGCTAAGGAAAACAAATGCTAACGAGCGGTCTGCTCTGGGGAAGTATAACAATGATGCACATGAAGACAGGTGGATGGCGCAAGCAACTGACAGCTCTGATTCTTCAAGACAATCTCGTGAAAAAGGAGCTTCGAGATCACAACATCCAAGTGACGACGAAGAAGGAGCAAAAATTGCATCTTCATGTGTGCCATTGTCAGTGTTGCTTGTTCCATCCTTAAAAGAGGCCGTTGCTGATGATCTAGAAGGATCAGCTGTGCGTGCGGTTTCTAATTCACTTGCAAGTATGGAACAGAAAAAGCCTGGATCCAGTGAGATTCTTGTTCAAAAATTGCTTCAGCGGTTGGCAAGCTCAACGGAACCTTCATTAAAGGAGCTCCAGGAATTCGCAGCTCAATTGTTCACCAAGGGCAAAGCAACATCTGGAGGAAAACAAGACGGGAATGCTGCAGCTGACAATAGCAAAAAGCAACACAAGGAACTTCATTCAACTGCTAATATGAATCCATTGGCTAGATTTCTTTTGTCAAGGTGGCAAGGTCAGGTGTCGAGGGATCTCAATGCTTCGTGA 2100 0.441 MADAGGLAETAGSRFSSLQLIGRGSFGDVYKGFDADLNKEVAIKVIDLEESEDDIEDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEFMAGGSVADMLQSGPPLDESSIACILRDLLHAIEYLHNEGKIHRDIKAANILLTESGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKNPAERPSAKELLKHRFIRNARKSPKLLERIRERPKFPIIQDAGTPRNGQNGMGEASDTVKVTRVLRGEETVRSSGQGAQVRNAGWDFSIGGSQSTGTVRSVPLPPQVREKRNEVTNNQANQRKAQENSYRAASIYKSVHHGSPEASLMKDAGDAFHGQHHDIHHENDELTGNASGTIVIRSPKGPQSPLAHEHSTLSGSNYASFEEDSCSGTVVLRDPHDDSDSPRTPKSRLGIQERTSNSSLEDSAMNLAEAKAAFRGGLRKTNANERSALGKYNNDAHEDRWMAQATDSSDSSRQSREKGASRSQHPSDDEEGAKIASSCVPLSVLLVPSLKEAVADDLEGSAVRAVSNSLASMEQKKPGSSEILVQKLLQRLASSTEPSLKELQEFAAQLFTKGKATSGGKQDGNAAADNSKKQHKELHSTANMNPLARFLLSRWQGQVSRDLNAS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00390 699 MobiDBLite consensus disorder prediction 425 496 - -
Pte17g00390 699 Coils Coil 48 68 - -
Pte17g00390 699 MobiDBLite consensus disorder prediction 341 377 - -
Pte17g00390 699 CDD STKc_MST3_like 13 286 - -
Pte17g00390 699 MobiDBLite consensus disorder prediction 524 567 - -
Pte17g00390 699 MobiDBLite consensus disorder prediction 360 377 - -
Pte17g00390 699 MobiDBLite consensus disorder prediction 544 565 - -
Pte17g00390 699 MobiDBLite consensus disorder prediction 647 675 - -
Pte17g00390 699 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00390 699 MobiDBLite consensus disorder prediction 462 477 - -
Pte17g00390 699 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 637 - -
Pte17g00390 699 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Pte17g00390 699 SUPERFAMILY Protein kinase-like (PK-like) 12 327 IPR011009 -
Pte17g00390 699 MobiDBLite consensus disorder prediction 478 496 - -
Pte17g00390 699 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00390 699 Coils Coil 357 377 - -
Pte17g00390 699 MobiDBLite consensus disorder prediction 438 457 - -
Pte17g00390 699 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00390 699 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pte17g00390 699 Gene3D Transferase(Phosphotransferase) domain 1 12 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00390 Pte-Chr17 5054037 5064184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00390 1 696 MAP Kinase Kinase Kinase Kinase AT3G15220 63.390 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pte17g00390 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00390 K08838 - cave:132174834 981.474