Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00389 ATGGTGGGCTCAGGAGCATCAGATAGAAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGCGTCTGTTTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGCCCAAGAGTCAGAGGTGGCAATGGCTGCAAGGTTGGAGATGATAATGGCAGCTTGATGTTAATGTGGGAAGATGGATTCTGCCGAGGAAGGGTTTCAGATTGTCTAGAAGAGATTGATGGGGAGGATCCTGTCAGAAAAGCCTTCAGCAAGATGTCTATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAAGTTGCATCTGATAAGTGCCATAAGTGGGTCTTTAAAGAGCCAACAGAATGTGAACCAAATATCTCTAACTATTGGCAAAGCTCTTTTGATGCTCTTCCTCCTGAATGGACTGACCAGTTCGAGTCAGGCATACAGACAATTGCTGTCATTCAAGCTGGTCATGGTCTTCTACAGCTTGGTTCTTGCAAAATTATTCCTGAAGATCTTCATTTCGTGCTTCGAATGAGGCATACATTTGAGTCCCTTGGTTACCAGTCTGGATTTTACTTATCACAACTTTTTTCTTCTACCAGAAACGCCAACACTTCTGCTTCTATTCCTTCAAAGCCATCTACTATTCCTATCCGGCCACCTCCTCCACTTTTCAACTGGGGTCAAAGGCCTCTAGCTTCTGCTGCTTCTATGCTCTCTTCACCAAATTTTCAGCATGCTGCAAGATTAGGTTTTCCACAGGCCAAAGATGAGACTCACATGTTTCTGATGCCTCCTTCATCTGAAGCAAGAATGGAAGGAATGATGAGTACTGAGCATGAGAATGACATCAAATGGCCAAATGGTCTGTCTTTCTTCAATGCACTCACTGGTCGAACTGATGATGCCAAACTTCTATTTAACCCTGAGAGCTTAGGAAACAAGCAAGACCAGAATCATCACTCTCTAATCCTTGAAGGGAAGAATACAGAGCCGAATTCTGATACCTCGAATTTGCAGAATGCTGGGGGAGGAAATCCAAATGAGTTCTTGAGCTTGGATAGCCATCCAGATAGCGCCAGGAAATTAGAGAACAAGTTCAAAAGAAGTTATACCTTGCCTGCAAGAGTGGCTACTTCATCATCCTCTACTTCAGTGGATCCCCATCAACAACAGGCAGTGGAGTATAGAAATTCAGGAGGAGGTATGTACTCGGATGTCATGGAGACCTTTTTGGATCAGTGA 1260 0.4437 MVGSGASDRSKEAVGMMALHEALRSVCFNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNANTSASIPSKPSTIPIRPPPPLFNWGQRPLASAASMLSSPNFQHAARLGFPQAKDETHMFLMPPSSEARMEGMMSTEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGNKQDQNHHSLILEGKNTEPNSDTSNLQNAGGGNPNEFLSLDSHPDSARKLENKFKRSYTLPARVATSSSSTSVDPHQQQAVEYRNSGGGMYSDVMETFLDQ* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00389 419 MobiDBLite consensus disorder prediction 331 361 - -
Pte17g00389 419 MobiDBLite consensus disorder prediction 331 353 - -
Pte17g00389 419 PANTHER GB|AAF34833.1 1 418 IPR044170 -
Pte17g00389 419 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 187 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00389 Pte-Chr17 5036720 5039448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00389 20 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.338 5.62e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00389 - - hbr:110655332 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00389 17 5036720 5039448 Pte17g00389 17 5036720 5039448 RCT