Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00385 ATGGTTGTTATCTTCGATTCCTCTAGACTGACAACTGAAGTGAAGTCCGTTGAGATGCACCACGAAGCTTTACAGGAAGCTCTTCCTAGTGATAATGTCGGTTTCAATGTAAAAGATATTGCTGTCAAGGATCTCAAACGTGGTTTTGTTGCATCCAACTCTAAGGATGATCATGCCAAAGAGGTTGCTCATTTCACCTCTCAAGTTATTATCATAAACCACCTTGGTATATTTCTTGAAAACGGTGATTCTGGTCTTGTTAAGATGATTTCCACAAAGTCTATAATTGTCGAGACTTTTCTCTTAATCTCTTCCTCTCGGTAG 324 0.392 MVVIFDSSRLTTEVKSVEMHHEALQEALPSDNVGFNVKDIAVKDLKRGFVASNSKDDHAKEVAHFTSQVIIINHLGIFLENGDSGLVKMISTKSIIVETFLLISSSR* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00385 107 PANTHER ELONGATION FACTOR 1 ALPHA 1 76 - -
Pte17g00385 107 SUPERFAMILY Translation proteins 2 57 IPR009000 -
Pte17g00385 107 Gene3D Translation factors 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00385 Pte-Chr17 5018537 5019490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00385 1 100 Eukaryotic Initiation Factors Gene Family AT5G60390 52.857 1.99e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00385 K03231 - zof:121998137 143.28