Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00376 ATGATGTTATCGGAGTCGCCGCCCTCGTTAACGAGGAGTTCGTTGGAAGAAATGTTGGATGCGCTTCGTCGAAGAGATGAGGAAGAGAAGCCAAAGGACTTGCCGCCGGCACTACCAGCTAGGCCTACCTCCAAAGCTCGGTTACCGTCGGCGAAAAGGTCGTTACCTAATAACTTCAAAGTTGGCAATGATGATGATGAGGATGACAGTGTTGTAAATGGGAGCTCAAATAGTAGTTGCTACGTTAGAGAAGATAGTAGTAAGAGGAAAGAGAAGGATTTCGGTTTGAAGAGAATTTTTTTTGGAGGGAAAAAGATGAAGAAAGATGTAGATTCACCTTATGTTTTAATTGCCCCAAAATACAAGAATGGTCGATCGGAACAACCAGTTTCGGCGACTACTTTTCATTCGCCTTTATCAGGAAAGAATGGAGAGCTTGATTGGGATGACGATGATACCGTTTTCATGAAAAGGAAACTTCATGTGTGGTGTAAGCATCCAAGTGGACATTGGGGATTGGGAACAATAACGTCAACTTTTGAGGAGGAGGCGTCTGTTTCTCTCTCAAATCACCATGTAATGAAGGTGCGGATAGGAGAGCTATTACCTGCTAACCCAGATGTTCTGGAGGGTGTTGATGATCTTTTACTGCTTAGTTACTTGAATGAGCCTTCAGTTCTTCACAACCTTCGGTTTAGATACTCCCGAAATATGATTTATACCAAAGCAGGACCTGTTTTAATAGCATTGAATCCCTTCAAAGATCTTGGATTATACAGTAATGACAACATCTCAGCATACAGACAGAACTTGGCAGAGAGTCCGCACGTTTATGCAGTTGCAGATGTAGCCTATTCTCAGATGTTGAGAGATGACACTAATCAATCCATTATTATCAGTGGTGAAAGTGGGGCTGGAAAGACAGAGACAGCAAATATCGCAATGCAATACATTGCTACTGTGGGTGTTGGCAGTGGTGGGATTGAAAATGAAATCCTCGAGACAAGTTATATCCTGGAAGCCTTTGGGAATGCAAAAACATCAAGGAATGATAACTCGAGCCGATTTGGAAAGCTGATTGAAATTCATTTCAACACACGGGGAAAAATATGTGGTGGCAAAATTGAAACATTTTTGTTAGAAAAGTCTAGAGTAGTTCATCTGTCCAATGGTGAGAGGTCATTCCACATATTTTATCAACTTTGTGCTGGTGCGACATCCGTTCTTAAAGAGAGACTAAACCTCAGAATGGCCAGTGAATATAAGTACCTTAATCAGAGTGAGTGCATTACGATTGGTGCTGTTGATGATTCTGCAAATTTCCACAGGCTCATGAAAGCCCTAAATATTTTACGGATATGCCAAGAGGATCAAGAGCACATATTTGAGATTCTTGCTGCTATATTATGGTTAGGAAACATATCATTCCGAGTACCTGAGAAGGAAAATCACGTGGAGGTGACTGTCGATGATGCTTTTATCAACACTGCGAAACTCATGGGCTGTGATTCCGAGGAGCTGAAGTTAGCTTTATCCACTCGTCAAATTCAATGTGGCAAGGACATGATTTCTGAAAAATTGACTCTACGACAGGCGGTTGACACAAGAGATGCTTTGGCCAAGTTTATGTATTTGAGCTTGTTCAACTGGCTTGTACAACGAATTAATAAGTCTTTGGGAGTTGGTAAACGACTTAAAGGAAGATCCATAAGCATTCTTGATATATATGGATTTGAATCATTTCAGAGAAATAGCTTTGAACAATTTTGTATAAATTATGCAAATGAGAGGCTCCAACAACATTTCAATCGCTATTTCTTTAAACTTGAGCAGGAGGACTGTGAATTGGATGGAATCGATTCAAATATAGTCAATTTTGAAGACAATCAAGAATGCTTGGATCTTTTTGAGAAGAAACCTTTAGGGTTACTCGCTTTGCTGGATGAGGAATCTGATATGCCGAAGGCCACCGATTTGACATTTGCTAATAAGCTTAAACAACACTTGAACATTAATCCTTGCTTTAAAGGAGAAAGAGGCAGGGCTTTCAGTGTTCGTCATTATGCAGGAGAGGTTTTGTATGATACAAACGGGTTTCTTGAAAAGAACAGAGATTCATTGCAGTGCAATTATATTCGGCTCCTGTTATCATGTAATTGGCAGCTGCTGAAGTTGGCTGCCACCAAAGTGCTTCACCAGATGGGGGCAAATGCCACACCAAAGCAGAGTATCGGTGCAAAGTTCAAGGGTCAAGTGTTCAAACTAATGCATCAGCTGGATAACACAACTCCACACTTTATAAGATGCATAAGGCCTAATACCAAGCGGCTTCCTGGGGTGTATGACGAACAACTTGTCTTGCAACAGCTTAGGAGTTATGGAGTTCTTGAGGTTGTTAGGGTTTCAAGATCTGGATATCCTACAAGAATGAGACATCAAGATTTTGCAGGAAGGTATGGATTTTTACTATCTAAGGGTAGTGTATCAAAGGATCCTCTAAGCATTTCAGTTTCTATTCTGCAACACTTTCATATACGACCAGAAATGTACCAAGTGGGTTATACCAAAGTGTATCTAAGGACTGGGCAGATTGATATTTTGGAGACAAGAAGGGAAAAAGTTATGCTTGGTGCACTCAGTATTCAGAAACAATACCGTGGTTGCAAGGCTCGCCAACATTTCCACTGTCTGAGGAATGTGGCAACAACATTGCAATCATTTGTTCGCGGAGAAATAATCAGAAAGACATATAGTTTTGTGGTTACCAGTTCTTTGCCTGGGAGTTTGGGAACACCTGATGAGCTTCAGGCAATTGTTAAAATACAATCTGTAATCCGCGGATGCATTGTTCGGTTGCATGTCAAGAACATGCATAATACTAGCAAAGCAAGTCCTGGAAATACAAAATCTAGGCAGAAGGAAATTGGCAAAGAGCCAGAAGCGAAGCAGGAAAATTCAAATGAGCAAAATCTGCTCTCAGCTTTAGTAGAGCTCCAAAAACGAGTTCTAAAAGCAGAATCAGCTCTGGAGCAAAAGGAAGAGGAAAATGCTGCATTGCGTGAGCAAATAAGACAGTCTGACAAGAGGTGGATCGATTATGAGATGAAGATGAAATCGATGGAGGAAACGTGGCAAAGACAGATGTCGTCACTGCAAATGAGTCTTGCTGCTGCAAAGAGGAGCCTTGCCACTGATAACGTTGCTTGTCAACCAGGAAGGATTGATGTCTCATCACCTCGCTTGTATGATTCTGAGGATGCTATTTCGATTGGATCTCGCACTCCTGGTGAAAATACACCTATCAAATTTTCTGATATAGGACGGCGTGAAGCTAATGGTTCATTGAGAACTGTGAGCAATTTGGCTAAGGAATTTGAGCGCCATAGACAGACATTTGACGACGAAGCCAAAGCACTAGTTGAGGTTAAATCAGCGCAACCTGTTAATTCAGACGATGAACTTAGGAGACTTAAACTTAGATTTGAGGCGTGGAAGAAAGATTACAAGGTTAGATTACGGGACACAAAGGCCAGGCTTCATAAACTATACCATTCAGAATTAGATAAAGGTCGCCGGAAGTGGTGGGGTAAGTTTAGCCCCAGGATATCATAG 3612 0.4136 MMLSESPPSLTRSSLEEMLDALRRRDEEEKPKDLPPALPARPTSKARLPSAKRSLPNNFKVGNDDDEDDSVVNGSSNSSCYVREDSSKRKEKDFGLKRIFFGGKKMKKDVDSPYVLIAPKYKNGRSEQPVSATTFHSPLSGKNGELDWDDDDTVFMKRKLHVWCKHPSGHWGLGTITSTFEEEASVSLSNHHVMKVRIGELLPANPDVLEGVDDLLLLSYLNEPSVLHNLRFRYSRNMIYTKAGPVLIALNPFKDLGLYSNDNISAYRQNLAESPHVYAVADVAYSQMLRDDTNQSIIISGESGAGKTETANIAMQYIATVGVGSGGIENEILETSYILEAFGNAKTSRNDNSSRFGKLIEIHFNTRGKICGGKIETFLLEKSRVVHLSNGERSFHIFYQLCAGATSVLKERLNLRMASEYKYLNQSECITIGAVDDSANFHRLMKALNILRICQEDQEHIFEILAAILWLGNISFRVPEKENHVEVTVDDAFINTAKLMGCDSEELKLALSTRQIQCGKDMISEKLTLRQAVDTRDALAKFMYLSLFNWLVQRINKSLGVGKRLKGRSISILDIYGFESFQRNSFEQFCINYANERLQQHFNRYFFKLEQEDCELDGIDSNIVNFEDNQECLDLFEKKPLGLLALLDEESDMPKATDLTFANKLKQHLNINPCFKGERGRAFSVRHYAGEVLYDTNGFLEKNRDSLQCNYIRLLLSCNWQLLKLAATKVLHQMGANATPKQSIGAKFKGQVFKLMHQLDNTTPHFIRCIRPNTKRLPGVYDEQLVLQQLRSYGVLEVVRVSRSGYPTRMRHQDFAGRYGFLLSKGSVSKDPLSISVSILQHFHIRPEMYQVGYTKVYLRTGQIDILETRREKVMLGALSIQKQYRGCKARQHFHCLRNVATTLQSFVRGEIIRKTYSFVVTSSLPGSLGTPDELQAIVKIQSVIRGCIVRLHVKNMHNTSKASPGNTKSRQKEIGKEPEAKQENSNEQNLLSALVELQKRVLKAESALEQKEEENAALREQIRQSDKRWIDYEMKMKSMEETWQRQMSSLQMSLAAAKRSLATDNVACQPGRIDVSSPRLYDSEDAISIGSRTPGENTPIKFSDIGRREANGSLRTVSNLAKEFERHRQTFDDEAKALVEVKSAQPVNSDDELRRLKLRFEAWKKDYKVRLRDTKARLHKLYHSELDKGRRKWWGKFSPRIS* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00376 1203 Gene3D Myosin VI head, motor domain, U50 subdomain 450 558 - -
Pte17g00376 1203 CDD MYSc_Myo8 224 860 IPR036022 -
Pte17g00376 1203 MobiDBLite consensus disorder prediction 1 84 - -
Pte17g00376 1203 ProSiteProfiles Myosin motor domain profile. 210 872 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 Gene3D - 393 449 - -
Pte17g00376 1203 PANTHER MYOSIN 203 1185 - -
Pte17g00376 1203 SMART iq_5 896 918 IPR000048 GO:0005515
Pte17g00376 1203 SMART iq_5 933 955 IPR000048 GO:0005515
Pte17g00376 1203 SMART iq_5 873 895 IPR000048 GO:0005515
Pte17g00376 1203 FunFam Myosin heavy chain 393 449 - -
Pte17g00376 1203 PRINTS Myosin heavy chain signature 622 650 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 PRINTS Myosin heavy chain signature 294 319 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 PRINTS Myosin heavy chain signature 337 364 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 PRINTS Myosin heavy chain signature 240 259 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 PRINTS Myosin heavy chain signature 569 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 Gene3D - 581 762 - -
Pte17g00376 1203 MobiDBLite consensus disorder prediction 959 989 - -
Pte17g00376 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 919 IPR027417 -
Pte17g00376 1203 MobiDBLite consensus disorder prediction 17 35 - -
Pte17g00376 1203 Gene3D Kinesin motor domain 209 805 IPR036961 -
Pte17g00376 1203 Pfam IQ calmodulin-binding motif 936 955 IPR000048 GO:0005515
Pte17g00376 1203 Pfam IQ calmodulin-binding motif 878 895 IPR000048 GO:0005515
Pte17g00376 1203 Coils Coil 981 1029 - -
Pte17g00376 1203 Gene3D - 877 921 - -
Pte17g00376 1203 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 157 214 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 ProSiteProfiles IQ motif profile. 897 926 IPR000048 GO:0005515
Pte17g00376 1203 SMART MYSc_2a 204 873 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 ProSiteProfiles IQ motif profile. 877 903 IPR000048 GO:0005515
Pte17g00376 1203 ProSiteProfiles IQ motif profile. 934 963 IPR000048 GO:0005515
Pte17g00376 1203 Pfam Myosin head (motor domain) 212 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte17g00376 1203 Gene3D - 806 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00376 Pte-Chr17 4885790 4897353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00376 1 1197 Myosins gene family AT5G54280 58.570 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00376 K10357 - qsa:O6P43_029040 1573.53