Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00358 ATGGAGAGTACTGATTCATCAACCGCACCACAACATCCAAACCTACCACCTGGTTTTCGATTCCACCCCACCGACGAGGAACTGGTGGTTCACTACCTTAAGAGAAAGACCTCTTCTGCTCCTCTACCTGTTGCCATAATCGCCGATATTGATCTTTACAAGTTTGATCCATGGGAGCTACCAGCTAAAGCTAGTTTTGGAGAGCAAGAGTGGTATTTCTTCAGTCCTAGGGACAGGAAGTACCCAAATGGTGCGAGGCCAAACCGGGCGGCAACTTCAGGTTACTGGAAGGCCACCGGAACTGATAAGCCGGTGTTATCTTCAGGTGGGTCTCAAAAGGTTGGGGTTAAGAAAGCTTTGGTGTTTTATGGAGGGAAGCCACCTAAAGGGGTAAAGACTAATTGGATCATGCATGAGTACAGGCTTGCTGATAACAATACCAGTCATAAGCCACCTGGATGTGACTTGGGTAACAAGAAAAATTCTCTCAGGCTTGATGACTGGGTGCTATGTCGAATCTACAAGAAAGCCAATACAAACAGACCATCTATGGATCACGACAGGGATGATTCGATAGATGACATGATGGGAAGGATACCGCCATCGATCAACGTCGGCCAATTGAATGGAAGACTGCAATTTCCAAAGATGTCGACAAGCTATGCCCGCGTATTGTTAGAAAATGATCACCAAAACTTAATGGAAGGCATCATGAGTGATAGTGGGATCAACGCGAGAGTTATTACATCTCCAATTGCCAATTCCAAGAGTAGAGAGCAGGTTGACATAGTTGATCACAATAATTCACTTCCACAGAAGAGAACACTCAGTTCCCTCTACTGGAATGATCATCATGAGGACATGGCCGGGGTCGGAGGAGCATCAATAAGCAATAAGAGAGTAGTGAGCATGGATAATGGTGATGGTAGTGTTGTGAGCACAGAGGAGAATGGTACAGCTAGTTCAATAGCCACTCTACTCAGCCAGCTGCCACAGACTCCTTCTCTACATCACCAGACAATGCTTGGGGATGGGGATGGGCTCCTTCGGCAACAGTTTCAACTTCATGGAATGAACTGGTACACTTGA 1089 0.4628 MESTDSSTAPQHPNLPPGFRFHPTDEELVVHYLKRKTSSAPLPVAIIADIDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSGGSQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNNTSHKPPGCDLGNKKNSLRLDDWVLCRIYKKANTNRPSMDHDRDDSIDDMMGRIPPSINVGQLNGRLQFPKMSTSYARVLLENDHQNLMEGIMSDSGINARVITSPIANSKSREQVDIVDHNNSLPQKRTLSSLYWNDHHEDMAGVGGASISNKRVVSMDNGDGSVVSTEENGTASSIATLLSQLPQTPSLHHQTMLGDGDGLLRQQFQLHGMNWYT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00358 362 MobiDBLite consensus disorder prediction 1 21 - -
Pte17g00358 362 FunFam NAC transcription factor 56 24 181 - -
Pte17g00358 362 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pte17g00358 362 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Pte17g00358 362 PANTHER NAC TRANSCRIPTION FACTOR 56 15 193 - -
Pte17g00358 362 SUPERFAMILY NAC domain 6 176 IPR036093 GO:0003677|GO:0006355
Pte17g00358 362 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00358 Pte-Chr17 4686483 4688206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00358 1 362 NAC Transcription Factor Family AT3G15510 52.742 2.20e-117 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte17g00358 NAM 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00358 - - qsa:O6P43_000935 533.487