Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00357 ATGGGAATTCGAGAGAAAGACCCTCTTGCTCAACTGAGTTTGCCTCCGGGTTTTCGGTTTTACCCGACTGATGAAGAGCTGCTGGTTGATTACCTGTGTAGAAAAGTAGCAGGGCACCATTTCTCTCTGCAAATTATTTGTGAAATTGATTTGTACAAATTTAATCCATGGGATTTACCAGCCAAAGCCATGTTTGGAGAGAAGGAATGGTATTTCTTTAGTCCAAGAGACAGGAAGTACCCAAATGGTTCAAGACCCAATAGAGTTGCCGGTACAGGGTATTGGAAAGCAACTGGTACTGACAAAATCATCACCAGTGAAGGTCGGAAAGTTGGTATCAAGAAAGCCCTTGTTTTTTACGTTGGTAAAGCACCCAAAGGCACGAAAACCAATTGGATTATGCATGAGTATCGTCTCATTGATTCTTCACGGAAAAATGGTAGCGCCAAGTTGGACGATTGGGTTTTATGTCGGATATACAAGAAGAATTCAAGCGCACAGAAAGCTGTGCCTAGTGTTTCACTTTCGAGCAAAGAATACAGTCACGGTTCTCCTTCTTCATGTTCATCACACTTGGACGATGTGTTGGAATCATTGCCGGATATTGATGACCGATTCTTTACCTTGCCCCGTATGAACTCGCTGAAGACACTACAGCAAGGTGAAAAACTCAATTTTCAGAATCTGGGTACTGGGAATTTCATGGACTGGACGAATCCGACAGGGATTAACGCGGCGCCTGAACTGGTTCAGAGCACACAGGGGATACTGAATTACCAAAGTAACAATGGCAACCACAATAACAGCAACGACTTCTACGTGCCTTCGATTCCTCAGATGTGTCAAATGGAAGAGGAGGTTCAAAGTGTAGTGAGGAATCGGCATCAACATGGAGTTGAGAATTCTTCTGGGTTTATTCAGCAAAACTCGAACTTGTTACCTCAGGGTTTTTCGAACTCGCTCGACCCGTTTGGGTTTAGATACCCGACTCAGTCGGTTGGTTTCGGGTTCAGACAATGA 1020 0.4412 MGIREKDPLAQLSLPPGFRFYPTDEELLVDYLCRKVAGHHFSLQIICEIDLYKFNPWDLPAKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGTGYWKATGTDKIITSEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLIDSSRKNGSAKLDDWVLCRIYKKNSSAQKAVPSVSLSSKEYSHGSPSSCSSHLDDVLESLPDIDDRFFTLPRMNSLKTLQQGEKLNFQNLGTGNFMDWTNPTGINAAPELVQSTQGILNYQSNNGNHNNSNDFYVPSIPQMCQMEEEVQSVVRNRHQHGVENSSGFIQQNSNLLPQGFSNSLDPFGFRYPTQSVGFGFRQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00357 339 FunFam NAC domain-containing protein 72-like 23 167 - -
Pte17g00357 339 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Pte17g00357 339 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Pte17g00357 339 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Pte17g00357 339 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 262 - -
Pte17g00357 339 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00357 Pte-Chr17 4664919 4666901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00357 1 340 NAC Transcription Factor Family AT4G27410 58.496 8.07e-126 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte17g00357 NAM 3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00357 - - qsa:O6P43_000934 495.352