Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00348 ATGAGGAGATTTTGTAACTGTGAGCTCTGTGGGAAGAGAGCAAGAACGTACTGTGAATCAGACAAGGCGAATTTATGTTGGGACTGTGACAAGAAAGTTCATGGTGCAAACTTTCTGGTAGCTAAGCACTCGAGGTGTCTTCTTTGCCACGCCTGCCAATCTCCAACTCCATGGAAAGCGGATGGACCTAAGCTGTTACCCACCGTTTCATTCTGTGAGGGTTGTGTAGGTATTCATAAGACCGACATAAACGATCTTGATGAAGACCGTGATAATCATTACCAGCTTGATCATGCTTCTAGTGATTATATTAATAACGATGATGGTGAGTACAGCTCTGTCAGTGACTATGAGGAACATGAATTTGATGGCGGTGGTGATGATAGTTCGGAAGAGGAAGGAGACAACCAGGTCGTGCCATTAGCTTTTGATGGTGCTTCGTCTCCAGCTCATGTGTTGAGTTGTTCCAATAGCGATGAAGAAATTTCAAGCTCTGGGGATGCAGTAATGGCTGCCAGTGATTTATCGTCTAAGCGTTTCGGAAGAGAACTCAACTCACGCAGATTTCTCTGA 573 0.4468 MRRFCNCELCGKRARTYCESDKANLCWDCDKKVHGANFLVAKHSRCLLCHACQSPTPWKADGPKLLPTVSFCEGCVGIHKTDINDLDEDRDNHYQLDHASSDYINNDDGEYSSVSDYEEHEFDGGGDDSSEEEGDNQVVPLAFDGASSPAHVLSCSNSDEEISSSGDAVMAASDLSSKRFGRELNSRRFL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00348 190 ProSiteProfiles Zinc finger B-box type profile. 2 48 IPR000315 GO:0008270
Pte17g00348 190 SMART bboxneu5 2 48 IPR000315 GO:0008270
Pte17g00348 190 MobiDBLite consensus disorder prediction 113 135 - -
Pte17g00348 190 Pfam B-box zinc finger 6 46 IPR000315 GO:0008270
Pte17g00348 190 CDD Bbox1_BBX-like 7 48 - -
Pte17g00348 190 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00348 Pte-Chr17 4543147 4546741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00348 7 144 C2C2-CO-like Transcription Factor Family AT5G54470 51.449 4.20e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00348 - - qsa:O6P43_029028 170.244