Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00343 ATGGACTCACACCGACAGTTTGGTTTCAGCTTGACTAGTGCAGGACTGCCGTATTCTTCTTCTCATCCATCTGTTCCGCCAATACCTTCTAGACTGCTTGGATCCTTGAAATTTGATATTGGAAATTCCCCTAATTCACCATTCTCCCACCACTTTGATTCTGATACTCTGTCTACACTAAGTGACAACCAGGATCAGTACGGCTCTGCGGAGATTCTATCTGGTATAAGCCCTTCTTGGAATAAAGTCGAAGTTAACAGTAACATACATGGACCAGTTCCATTTTTTTATGGTCGGCAAGATGTCATGAGCCACTGTTCTGCTAGAACCTCTTTTTCACAAGAACCAAGCTGTAGCCAGGAAATCAAAAGTGCCTTGCAGGAACTAGAGACTGTTCTAATGAGTCCTGACAATGATGAAGTTACCACATCTGATACATCTTTTGCAGGAAGTAGCAGACAGCATGCATTAAACCACAGATCTAAGTCATGGGGTCGCGTTCCTCAGCGTCCCCAATTAAATCGAACTCGGTCACTTCTTGTTCCTTTTAGCGGGCAGTCAAGTGAAGTTGGTGACCTGGAGAAACATAATAAAATTTTGGAGGAAGCATCTCTACAATATTCTCCACAAAACAGTTTGAAACAGTTGCTGATTGCATGTGCTAAAGCTCTTTCAGAAAACAATATAAGCTATTTTGATGAACTCGTTGGAAATGCTCGAAATGTGGTATCTATCAGTGGGGAACCAATCCAACGGCTTGGTGCTTACATGTTGGAAGGGTTGGTAGCCAGGAAAGAGGCATCAGGGACTGGTATCTATCGTGCCCTTAGGTGCCGAGAACCTGAAAGCAAAGATTTACTTTCATACATGCATAGCCTTTATGAAATCTGCCCTTACTTTAAGTTTGGCTACATGGCTGCCAATGGTGCTATTGCTGAAGCTTGCAGAAACGAAGACCGAATTCACATTATAGATTTTCAGATTGCTCAAGGAACTCAGTGGATCACGCTTCTTCAAGCTCTTGCTGCAAGACCAAGTGGGGCTCCTCGTGTGAGAATCACAGGGATCGACGATCCTCTTTCCCAATATGCTCGTGGTGATGGATTGGAGATGGTAGGCAGACGGTTGACTGCAATATCTCAGAAATTCGGTATCCCAGTCGAGTTTAATGGACTGCCAGTTTTTGCTCCTGATGTGACACCTGCAATGCTTCACATCAGACCTGGGGAGGCTTTGGCTGTGAACCTCCCATTGCAGCTCCATCATACCCCAGATGAGAGTGTTGACTTGAGCAATCCAAGGGATGGTCTTTTGAGAATGATCAAGTCACTTTCTCCCAAGGTGACCACTCTGGTGGAGCAAGAATCAAACACCAACACGACCCCTTTCTACAATAGATTCATAGAAACTCTAGATTACTATTTAGCGATGTTTGAGTCGATTGAAGTGGCCTTACCAAGAAATAGTAAGGAGAGGATCAATGTGGAGCAACATTGTCTGGCCAGGGATATTGTTAACATCATATCTTGTGAGGGGAAGGATAGGGTGGAGCGTCATGAACTCTTTGGCAAGTGGAAGTCTAGGTTCACAATGGCAGGGTTCAAGCAGTACCCCTTGAGCTCTTATGTGAACAACGTTATAAGAAGCCTGCTGCGATGCTACTCAGAGCATTACACACTAATTGAGAAGGATGGGGCAATGCTTTTAGGTTGGAAGAATAGAAATCTAATTTCGGCTTCGGCCTGGCAGTGA 1752 0.4446 MDSHRQFGFSLTSAGLPYSSSHPSVPPIPSRLLGSLKFDIGNSPNSPFSHHFDSDTLSTLSDNQDQYGSAEILSGISPSWNKVEVNSNIHGPVPFFYGRQDVMSHCSARTSFSQEPSCSQEIKSALQELETVLMSPDNDEVTTSDTSFAGSSRQHALNHRSKSWGRVPQRPQLNRTRSLLVPFSGQSSEVGDLEKHNKILEEASLQYSPQNSLKQLLIACAKALSENNISYFDELVGNARNVVSISGEPIQRLGAYMLEGLVARKEASGTGIYRALRCREPESKDLLSYMHSLYEICPYFKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWITLLQALAARPSGAPRVRITGIDDPLSQYARGDGLEMVGRRLTAISQKFGIPVEFNGLPVFAPDVTPAMLHIRPGEALAVNLPLQLHHTPDESVDLSNPRDGLLRMIKSLSPKVTTLVEQESNTNTTPFYNRFIETLDYYLAMFESIEVALPRNSKERINVEQHCLARDIVNIISCEGKDRVERHELFGKWKSRFTMAGFKQYPLSSYVNNVIRSLLRCYSEHYTLIEKDGAMLLGWKNRNLISASAWQ* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00343 583 MobiDBLite consensus disorder prediction 137 167 - -
Pte17g00343 583 ProSiteProfiles GRAS family profile. 204 583 IPR005202 -
Pte17g00343 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 169 579 IPR005202 -
Pte17g00343 583 Pfam GRAS domain family 213 583 IPR005202 -
Pte17g00343 583 MobiDBLite consensus disorder prediction 137 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00343 Pte-Chr17 4493060 4496673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00343 121 584 GRAS Transcription Factor Family AT5G48150 55.365 3.04e-179 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte17g00343 GRAS 8.6e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00343 - - qsa:O6P43_028973 854.358