Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00342 ATGAAGGAGGAGTCCATAGGGCTGATCATAGGGATCTCTATTGGTGTGGTGATTGGAATTGGTTTGGCGATATCTGCAATATTTTGCCATAAGTTCCACAGAAAACGTTCACAGATAGGTAATAGCAGTTCGAGAAGGGCAGCTACCATACCCATTCGCACAAATGGTGCTGATTCTTGTACCATACTTTCAGACTCAACAATAGGTCCTGAATCACCTGTAAAGTCTGGTAGAAATGGCCGGTCTTGCTTTCATAGATTTAAGAAGAACAACATCGTTTCAGCGTCTGGGATACCCGAGTATTCATACAAGGATTTACAAAAGGCTACATACAATTTTACAACATTGATTGGTCAAGGCGCTTTTGGTCCTGTGTATAAAGCGCTGATGTCAACTGGTGAAACTGTGGCTGTGAAAGTTCTTGCCACTGATTCAAAGCAAGGGGAGAAAGAATTCCAAACAGAGGTGGAATGTCATATGCTATGCACATAG 492 0.4228 MKEESIGLIIGISIGVVIGIGLAISAIFCHKFHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTIGPESPVKSGRNGRSCFHRFKKNNIVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKALMSTGETVAVKVLATDSKQGEKEFQTEVECHMLCT* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00342 163 Gene3D Phosphorylase Kinase; domain 1 84 162 - -
Pte17g00342 163 ProSiteProfiles Protein kinase domain profile. 111 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00342 163 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 157 - -
Pte17g00342 163 SUPERFAMILY Protein kinase-like (PK-like) 98 161 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00342 Pte-Chr17 4477962 4478737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00342 69 157 Receptor kinase-like Gene Family AT1G51830 37.079 3.02e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte17g00342 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00342 - - pvy:116107725 243.817