Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00341 ATGCTATTGGGAAGGTTACATCACAGGAATCTTGTGAATCTGGTAGGATACTGTGCAGAGAAAGGACAGAACATACTTGTATATGTCTACATGAGTAAAGGCAGCCTGGCTTCTCATCTATACAATCAGGGGGACGAGCCATTGAGTTGGGATTTGAGGGTCCAGATAGCTTTAGATGTAGCAAGGGGCTTGGAGTATCTGCATGACGGGGCCATTCCTCCTGTGATTCACCGTGACATAAAATCTTCCAATATATTGTTGGACCAGTCAATGCGAGCTCGGTATATCACAGCCATTGTCAGCAGCCAGGCTGCCTCTTTTCCTATTTGA 330 0.4576 MLLGRLHHRNLVNLVGYCAEKGQNILVYVYMSKGSLASHLYNQGDEPLSWDLRVQIALDVARGLEYLHDGAIPPVIHRDIKSSNILLDQSMRARYITAIVSSQAASFPI* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00341 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00341 109 PANTHER OS01G0750732 PROTEIN 2 94 - -
Pte17g00341 109 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Pte17g00341 109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Pte17g00341 109 SUPERFAMILY Protein kinase-like (PK-like) 2 93 IPR011009 -
Pte17g00341 109 Pfam Protein tyrosine and serine/threonine kinase 3 92 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00341 Pte-Chr17 4476693 4477730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00341 2 94 Receptor kinase-like Gene Family AT1G67720 61.702 9.21e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte17g00341 PK_Tyr_Ser-Thr 2.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00341 - - mnt:21404023 178.333