Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00340 ATGGTGGATAAGCATGCAGATAATATAAGGGGTACCTTTGGCTATCTTGATCCTGAGTATATATCTACTCGATCGTTCACCAAGAAGAGTGATGTGTACAGCTATGGAGTTTTGCTCTTTGAACTAATAGCTGGCAGAAATCCTCAGCAGGGTCTTCTGGAATATGTTGAGCTGGCAGCAATAAATGCCGACGGGAAAGTTGGTTGGGAAGAACTAGTGGATTCCCGCCTTGATGGAAAATTCGATAATCAAGAGCTGAATGAAGTGGCAGCAATTGCTTTCAAATGCATCAACCGCTCCCCAAGGAAGCGGCCTTCCATGAGGGACATAGTGCAGGTGCTGACTCGAATTCTTAAACTGAAGCGCAACAGCAGTCTCCATAAAAAGACACTATCTGCTATGACAGATGAAGTTTCCGTAAATATTGAGCAGCTAGATGCAAAGATTGCTACCAATGAACATAGGAGAGAAGAATCTATTGATAGCAATGCTGATACCTTCGAAGTATAA 510 0.4294 MVDKHADNIRGTFGYLDPEYISTRSFTKKSDVYSYGVLLFELIAGRNPQQGLLEYVELAAINADGKVGWEELVDSRLDGKFDNQELNEVAAIAFKCINRSPRKRPSMRDIVQVLTRILKLKRNSSLHKKTLSAMTDEVSVNIEQLDAKIATNEHRREESIDSNADTFEV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00340 169 SUPERFAMILY Protein kinase-like (PK-like) 7 128 IPR011009 -
Pte17g00340 169 Gene3D Transferase(Phosphotransferase) domain 1 2 143 - -
Pte17g00340 169 Pfam Protein tyrosine and serine/threonine kinase 12 114 IPR001245 GO:0004672|GO:0006468
Pte17g00340 169 PANTHER OS01G0750732 PROTEIN 9 135 - -
Pte17g00340 169 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00340 Pte-Chr17 4475979 4476640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00340 8 117 Receptor kinase-like Gene Family AT2G28250 41.026 1.97e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte17g00340 PK_Tyr_Ser-Thr 1.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00340 - - egr:104450198 266.544