Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00337 ATGGGAGAGAATCGGCACGAAGCAACGACATCTTCTAGGTTGGGGTTGAGAAGTGCAGGTGGCGAAATCGTAAAGGTACAAGGAGGTCACATTGTTCGCTCTACTGGAAGAAAGGACAGACACAGCAAGGTTTGTACGGCAAAGGGTCCAAGAGACCGAAGAGTCCGTCTCTCTGCTCCCACAGCTATTCAATTCTACGACGTACAAGACCGCCTTGGCTACGACCGTCCAAGCAAAGCCGTCGATTGGCTTATAAAAAAGGCCAAGGCAGCCATAGACGAGCTTGCGGAACTCCCAGCATGGGACCCACGTGCGACCAACGCAAGCTCACAACACCCGTACCAGGACCAGCCGCCGCAAATGAATCGAGAGAACGACAACCCCATTGGTGTCCACCCCCGTACCTCGGCAGACACCGTTGGTTCTGCTAACCGAAGAGCAACGGCCACACTGGTAGGTACCCATGTTGGGAGCAGACTGTCAAATTGTACTGTGAGGAATCTTCAAAGACAGTTAGACGAAAACGCAAATACGAACACTTCGAGTTTTCTCCCACCGTCATTGGAATCCGACTCCATCGTCGATACAATCAAGTCCTTCTTCCCGACGGGTGCGACAGCGGAGACCCCACCATCGACTGTGCATTTTCAGACTTTCCTACCAGATTTGCTGTCTAGGACTAGTAGCCAAGATCAAGATCTGCGGCTTTCGCTTCAATCCTTTCAGGACCCAGTTCTGCTTCATCATCATCATCGAGCTCAGCACCAACCTCAAAATCAGAATCAAACTGAACACGTACTTTTCTCTGGAACTAACCAACTTGGATTTGACGGTTCTTCCACCGGATGGTCAGAACAGCCTCATCCAGTTGAATCTGGTCGGTTTCAGAGAATGGTAGCTTGGAATTCTGGTGCTGCTGATGCCGGCAGTAGTGGTCATGGTACGACTGCTGGTGGTGGCGGAACCTTTCTATTCAGTTCGCCAGCACCAATGCATGCTCAACTGCCATCACCACTACTGCCATTTTCTGGCCAAAGCCAGTTTCTTTCACAGAGGGGACCCCTTCAGTCCAGCAACACTCCAATTCGTGCTTGGATAGACTCGTCAATTGCAGCAGTGACAGCAACTGTCACCGATTACCATCACCACCACAACAGTCTTCCACAAAACATTCATCAGATTCCTTTTTCCAGTTTAGGATTCACCTCGGGCGGATTCTCTGGCTTCCAAATTCCAGCACGAGTTCAGGGTGAAGAGGAACACGATGGCATATCAGATAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCATTGA 1314 0.5076 MGENRHEATTSSRLGLRSAGGEIVKVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWDPRATNASSQHPYQDQPPQMNRENDNPIGVHPRTSADTVGSANRRATATLVGTHVGSRLSNCTVRNLQRQLDENANTNTSSFLPPSLESDSIVDTIKSFFPTGATAETPPSTVHFQTFLPDLLSRTSSQDQDLRLSLQSFQDPVLLHHHHRAQHQPQNQNQTEHVLFSGTNQLGFDGSSTGWSEQPHPVESGRFQRMVAWNSGAADAGSSGHGTTAGGGGTFLFSSPAPMHAQLPSPLLPFSGQSQFLSQRGPLQSSNTPIRAWIDSSIAAVTATVTDYHHHHNSLPQNIHQIPFSSLGFTSGGFSGFQIPARVQGEEEHDGISDKPSSASSDSRH* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00337 437 MobiDBLite consensus disorder prediction 414 437 - -
Pte17g00337 437 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 357 IPR005333 GO:0003700
Pte17g00337 437 MobiDBLite consensus disorder prediction 104 127 - -
Pte17g00337 437 ProSiteProfiles TCP domain profile. 37 95 IPR017887 -
Pte17g00337 437 Pfam TCP family transcription factor 36 125 IPR017887 -
Pte17g00337 437 MobiDBLite consensus disorder prediction 415 437 - -
Pte17g00337 437 MobiDBLite consensus disorder prediction 104 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00337 Pte-Chr17 4457600 4459974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00337 3 438 TCP Transcription Factor Family AT1G53230 48.546 9.45e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte17g00337 TCP 5.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00337 - - qsa:O6P43_001018 516.153