Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00336 ATGGCACAATTACCTCCCAAAATTCCAACCATAACTCAGAACTGGCCCTCCTTACCCCATCAGAAAATGCCAACCGCCATGGCAAACTTTATCCCCGCCAATAAAGCCACCCTCACCCTCACCCCACCATCTCAAACCCAACAACAACAACCACCCTCCTGGGTTGATGAGTTCCTCGACTTCTCGTCCAAACGGCGTGGAGCCCACAGGCGGTCGGCGAGTGACTCCATTGCATTTCTAGAGACCAGCAGTACATTTCTTGAAGAATGTGGCAGGAACTTGACCACCGGCACGGCTGGAACCAACGGGTTTGACAGATTGGACGATGCACAACTCATGTCGATGTTCAATGACGACCTAACTGGCTCCTTGCCGTCCAATCCTTCCACCCCGTCAGACCAAAACAGCAACAACGACGAAAAGCCAATGGTATCGGACCATCAAACGCAGCAGCTGCAGCAGCCAAAGAATGAACCTGGAGAGGTTGATAGCTCATGCAAACCTGCACCACCAGGACCGACGGCACCATCTTCCAACATCAGCAGTGACCATACCAACGATCCCAAAAGAGTAAAGAGAATTTTGGCTAATAGACAATCAGCTCAGAGGTCAAGGGTGAGGAAACTACAATATATCTCCGAGCTTGAACGCAGCGTAACGACATTGCAGACAGAGGTATCAGCACTATCACCAAGGGTTGCTTTCTTGGATCACCAACGTTTGATTCTCAATGTAGACAACAGTGCCTTGAAGCAAAGAATTGCAGCTTTGGCTCAAGACAAGATTTTCAAAGATGCACATCACGAAGCTTTGAAGAAGGAAATAGAGAGATTAAGGCAAATATATCACCAGCAGAGCCTAAAGAAGATGGGAAACCCAGCCACCAACAATGCACATTCCGCTAATCCTCCATCAGCAGCCGCAGCAGTATCCCAACAACCGCCAATCTCCGATCCTATGGGCTGTACGGACAAGGAGCTCCTCCTGAGTTAA 993 0.4935 MAQLPPKIPTITQNWPSLPHQKMPTAMANFIPANKATLTLTPPSQTQQQQPPSWVDEFLDFSSKRRGAHRRSASDSIAFLETSSTFLEECGRNLTTGTAGTNGFDRLDDAQLMSMFNDDLTGSLPSNPSTPSDQNSNNDEKPMVSDHQTQQLQQPKNEPGEVDSSCKPAPPGPTAPSSNISSDHTNDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHHEALKKEIERLRQIYHQQSLKKMGNPATNNAHSANPPSAAAAVSQQPPISDPMGCTDKELLLS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00336 330 MobiDBLite consensus disorder prediction 117 160 - -
Pte17g00336 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Pte17g00336 330 MobiDBLite consensus disorder prediction 288 330 - -
Pte17g00336 330 Gene3D - 188 286 - -
Pte17g00336 330 Pfam bZIP transcription factor 189 234 IPR004827 GO:0003700|GO:0006355
Pte17g00336 330 MobiDBLite consensus disorder prediction 288 318 - -
Pte17g00336 330 SUPERFAMILY Leucine zipper domain 189 243 IPR046347 GO:0003700|GO:0006355
Pte17g00336 330 FunFam Basic leucine zipper 61 188 261 - -
Pte17g00336 330 CDD bZIP_plant_RF2 190 240 IPR044759 GO:0003700|GO:0006355
Pte17g00336 330 Coils Coil 268 288 - -
Pte17g00336 330 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Pte17g00336 330 MobiDBLite consensus disorder prediction 117 188 - -
Pte17g00336 330 PANTHER BASIC LEUCINE ZIPPER 34 1 313 - -
Pte17g00336 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 239 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00336 Pte-Chr17 4443017 4445278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00336 1 266 bZIP Transcription Factor Family AT3G58120 55.776 5.24e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte17g00336 bZIP_1 8.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00336 - - qlo:115954863 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00336 17 4443017 4445278 Pte17g00336 17 4443017 4445278 RCT