Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00334 ATGGGAGAGAATCGGCACGAAGCAACGACATCTTCAAGGTTGGGGTTGAGAAGTGGAGGTGGAGAAATCGTAGAGGTACAAGGAGGTCACATTGTTCGCTCTACTGGAAGAAAGGACAGACACAGCAAGGTTTGTACGGCAAAGGGTCCAAGAGACCGAAGAGTCCGTCTCTCTGCCCCCACAGCTATTCAGTTCTACGACGTACAAGACCGCCTTGGCTACGACCGTCCAAGCAAAGCCGTCGATTGGCTTATCAAAAAGGCCAAGGCAGCCATAGACGAGCTTGCGGAGCTACCAGCATGGGACCCACTTGCGACAAACTCAAGCTCACAGCACCCGTACCAGGACCAGCCGCCGCAAATGAATCGAGAGAACGACAACCCCATTGGTGTCCATCCCCGAACCTCGGTAGACACCGTTGGTTCTGCTAACCCAAGAGCAACGGCCACATTGGTAGGTAACCTTGTTGGGAGCAGACTGTCAGATTGTACGGTGAGGAATCTTCAAAGACAGTTAGACGAAAACGCAAATACGAACACTTCGAGTTTTCTCCCACCATCGTTGGAATCTGACTCCATCGTCGATACAATCAAGTCCTTCTTCCCGACGGGTGCGACAGCGGAGACCCCACCATCGACTATGCATTTTCAGACTTTTCTACCAGATTTGCTTTCTAGGACTAGTAGCCAAGATCAAGATCTGCGGCTTTCGCTTCAATCTTTTCAGGACCCAGTTCTGCTTCATCATCATCATCAAGCTCAGCACCAAGCTCAAAATCAGAATCAAACTGAACACGTACTTTTCTCCGGAGCTAACCAACTTGGATTTGACGGTTCTTCCACCGGATGGTCAGAACAGCCTCATCCAGTTGAACCTGGTCGGTTTCAGAGAATGATAGCCTGGAATTCTGGTGCTGCTGATGACGACAGTAGTGGTCATGGTACAACTGCTGGTGGTGGTGGTGGAGGAGCCTTTGTATTCAGCTCGCCACCACCAACGCATGCTCAATTGCCACCACCACTACAGCCATTTTCTGGCCAAAGCCAGTTTCTTTCACAGAGGGGACCCCTTCAGTCCAGCAACCCTCCAATTCGTGCTTGGATAGACTCGTCCATTGCAGCAGTGACAGCAACTGTCACCGATTACCATCACCATCACAACAGTATTACACAAAACATTCATCAATTTCCGTTTTCCGGTTTAGGATTCACCTCGGGTGGATTCTCTGGTTTCCAAATTCCAGCACGAATTCAGGGTGAAGAGGAACACGATGGCATATCAGATAAGCCATCCTCTGCTTCCTCCGATTCTCGCCATTGA 1320 0.5015 MGENRHEATTSSRLGLRSGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWDPLATNSSSQHPYQDQPPQMNRENDNPIGVHPRTSVDTVGSANPRATATLVGNLVGSRLSDCTVRNLQRQLDENANTNTSSFLPPSLESDSIVDTIKSFFPTGATAETPPSTMHFQTFLPDLLSRTSSQDQDLRLSLQSFQDPVLLHHHHQAQHQAQNQNQTEHVLFSGANQLGFDGSSTGWSEQPHPVEPGRFQRMIAWNSGAADDDSSGHGTTAGGGGGGAFVFSSPPPTHAQLPPPLQPFSGQSQFLSQRGPLQSSNPPIRAWIDSSIAAVTATVTDYHHHHNSITQNIHQFPFSGLGFTSGGFSGFQIPARIQGEEEHDGISDKPSSASSDSRH* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00334 439 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 359 IPR005333 GO:0003700
Pte17g00334 439 MobiDBLite consensus disorder prediction 103 124 - -
Pte17g00334 439 MobiDBLite consensus disorder prediction 304 358 - -
Pte17g00334 439 MobiDBLite consensus disorder prediction 340 358 - -
Pte17g00334 439 ProSiteProfiles TCP domain profile. 37 95 IPR017887 -
Pte17g00334 439 Pfam TCP family transcription factor 36 116 IPR017887 -
Pte17g00334 439 MobiDBLite consensus disorder prediction 418 439 - -
Pte17g00334 439 MobiDBLite consensus disorder prediction 103 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00334 Pte-Chr17 4423315 4424634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00334 3 440 TCP Transcription Factor Family AT1G53230 48.775 2.48e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte17g00334 TCP 1.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00334 - - qsa:O6P43_001018 481.1