Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00329 ATGATCCACGGTGGGGTTTCTGGTCTGCGCTCATGCTGCTTATGTCTTCCTTACTTGCAAAAGCAGCCTCTCTTCCGGTCAGCAAGGGGTTTATTCAGTTGCAGCCGGCGACTGCTGACAACTGCGTGTGCAAAGACTGGTAAGGATAATAAGCAGAAGGTCGTTGTGATATCTGGACCAACTGGGGCAGGTTGTGCCCTTGAAATTATGTTGATACAAGGTGGTGTTTGGTCACAGGTTTATCAGGGTCTTGATATTGGAACTGCCAAGCCGTCCCTAAGTGATAGAAAGGAGGTACCACATTATCTGATTGACATATTACAGCCATCTGAAGATTATTCAGTTGGGCAATTTTTTGAGGATGCAAGGCTTGCAACAAGACATATTCTTGATAAGGGTCGTGTTCCCATAGTTACAGGAGGGACAGGATTATATCTACGGTGGTTCATATACGGAAAACCTGATGTTCCAAAAGCATCCCCAGAGATTATCTCCGAGGTATCATCAGAATTAGATGAGTTGCAGAGAAATGAAGATTGGGCTGCTGCTGTTGAGTTGGTAGTAAAAGCCGGTGATGCAAAGGCCCAGCTATTACCCGCAAATGATTGGTATCGTTTGCGGCGCAGCTTGGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCAAGTACCATATGATTCTTTTAAGGAACAGATTGGTTCAACTGCAGTGAATCCTCAAGAAGTCAACTCTTCTGCTTATGCAATAGAAGAAACCATACCAAAGGAACTGGATTATGATTTCATTTGTTTTTTCCTTTCTAGCCAACGATTTGATCTTTACAGATCAATTGACTACCGGTGTGAAGACATGCTATCAGGAAGAGATGGAATTTTATCTGAAGCTCAATTGCTCCTTGATGGAGGTCTTCTGCCCAATTCAAATTCTGCAACTCGAGCAATTGGTTATAGACAAGCAATGGAGTACTTGCTAATGTGCCGACAAAATGGAGGCATAAGTTCGGAACGAGAATTTTACAGATTCGTATTTGAATTTCAGAAAGTATCAAGGAATTTCGCTAAACGTCAGTTGACTTGGTTCCGTAATGAGCAAATATATCACTGGCTTGATGGGTCTAAACCTATGGAAAAAGTTCTCAAGTTCGTCTATGATGCTTACTATGATAAAAGTGGAATTTTGACTGTTCCTCAAGACCTGCGAATGAAGAAAGATACAAACCCAAGAGAAGCTTCTGCCCTGAAGTCCTATCGCCCCCAAAACAGGTTATTTGTCAAACGCGAAGATTGTTATCCTGTTTTGGAGTGGATAAGAAGAACTCAAGGGTCAAGAAATGAACTTGAGCTTCAGCTAACTTGA 1362 0.4222 MIHGGVSGLRSCCLCLPYLQKQPLFRSARGLFSCSRRLLTTACAKTGKDNKQKVVVISGPTGAGCALEIMLIQGGVWSQVYQGLDIGTAKPSLSDRKEVPHYLIDILQPSEDYSVGQFFEDARLATRHILDKGRVPIVTGGTGLYLRWFIYGKPDVPKASPEIISEVSSELDELQRNEDWAAAVELVVKAGDAKAQLLPANDWYRLRRSLEIIKSSGSPPSAFQVPYDSFKEQIGSTAVNPQEVNSSAYAIEETIPKELDYDFICFFLSSQRFDLYRSIDYRCEDMLSGRDGILSEAQLLLDGGLLPNSNSATRAIGYRQAMEYLLMCRQNGGISSEREFYRFVFEFQKVSRNFAKRQLTWFRNEQIYHWLDGSKPMEKVLKFVYDAYYDKSGILTVPQDLRMKKDTNPREASALKSYRPQNRLFVKREDCYPVLEWIRRTQGSRNELELQLT* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00329 453 Hamap tRNA dimethylallyltransferase [miaA]. 54 382 IPR018022 GO:0008033
Pte17g00329 453 Pfam IPP transferase 79 365 - -
Pte17g00329 453 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 51 370 IPR039657 -
Pte17g00329 453 Gene3D - 155 225 - -
Pte17g00329 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 205 IPR027417 -
Pte17g00329 453 Gene3D - 51 414 IPR027417 -
Pte17g00329 453 FunFam tRNA dimethylallyltransferase 9 154 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00329 57 325 C2H2 Transcription Factor Family AT2G27760 23.158 6.69e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00329 K00791 - jre:109012517 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00329 17 4320593 4362474 Pte17g00329 17 4320593 4362474 RCT