Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00327 ATGGTGATCCCAATGGAATTGCCATTACAGCAGCTTCATTCACATGGTCCTAAAATGTCATATAATATTGAAGCCAAAAATCTATCCTACAAGTTATGCAGTCAGTTTGACAAGTATAAGAGAGAATTTTTTGGTTGGGAGTCAAAAAGTGACGGTAAGTTCATCTTGAAGGATGTAAACTGTGAAGCAAGGTCTGCAGAAATAACAGCTATTGCTGGTCCTAGTGGTGCAGGCAAGACCACGCTTCTTGAAATCCTTGGAGGTAGAATATCACCTAGAGAATTCTCAGGTGAAGTGCTTGTCAACAATAGATCGATAATAAATCAATCTTTCGTGAGAAAATATGGGTATGTTGCACAAGATGATGCTCTATTCCCATTACTTACGGTTAAAGAAACACTCATGTATGCTGCTCTGCTGAGGCTTCCAGGTGGGAGAAAGGTAGCCGCTGCTAGAGTGGCCGAGCTGATGAAAGTGCTTGCTTTAGAACATGTTGCTGACTCGAGAATCGGTAGCATGTCAAACCGGGGAGTTTCTGGTGGGGAAAGGCGTAGGATTTCTATTGGAGTCGATTTAGTTCATGATCCATCCGTTGTTTTTATTGATGAACCAACCTCGGGATTGGATTCAGCTTCTGCTCTTAATGTAGTCTTATTGCTTAGAAGATTGGCTGCGAATCAAGGTAAGACTATTGTTGTGACCATCCACCAACCCGGGTACCGAATCCTTGAGCTCATTGATCACTTTGTTTTGCTTTCCAATGGCTATGTCATGCATAATGGACCTTTGAATCTGCTCCAAGAGAAGCTTATTTTTGCTGGTCACCACATTCCAGACCATGTCAACGTCCTTGAATTCGCAATTGATATGATAGGAAGCTTGTACATAGACTATGCAGACACCATGAGACAAAAATGTGTTCTCACAGACGAACACAAGGGAGAGATCAGAAACATAAATAACTCAGAAGAAGAGGTGGTTTTCTATCCAAACTCTCGAATCATTGAGACTACGATTCTTGGACAAAGATTTTGCAAAAACATATTCAGAACCAACCAGCTCTTTGCCACCAGAGTTATACAAGCTTTAGTGGCTGGCTTTGTTCTTGGGACTATATTCTTAAATGTTGGCAGGGAACAAGGTGAAGTTGCATTACAAACAAGAACCGGGTTTTTTGCTTTCAGTCTCACCTTCTTGCTGTCTTCAACAACAGAAGGCCTTCCCATTTTCTTGCAGGAAAGAAGAATTCTCATGAGTGAGACCTCAAAAGGTGCTTATAGGATTTCCTCCTATGTTCTAGCTAACACCCTTGTCTTTCTTCCTTTCCTTTTGATGGTTGGTCTTCTGTACACGATCCCAGTTTATTGGCTAGTTGGTTTGAGAAATTCCATCGATGGATTTCTGTACTATTCCCTGGTGGTTTGGATGGTTATCTCGACATCAAATTCTTTTGTGTCATGTTTCAGTGCTCTAGTGCCAAATTTCATCATGGGAACTTCAGTCATTGCAGGACTCATGGGATCATTTTTTCTGTTCTCAGGGTACTTTATATCAAAGAAAAATATTCCTAACTATTGGATTTTTATGCATTATATGAGTTTGTTCAAGTACCCTTTTGAGTGTTTCATGATCAATGAGTATGGAGGAGAGCAAGGTAGAAAACATTGCATTCAATTAGAAAATGGAAAATGCAGTATGACCGGGGCTCATTTCTTAACACAGCATGGTCTGAAAGAGTCTCAGAAGTGGACCAACTTATTGGTGATGCTGGGTTTCATTGTCGGCTATAGGGTGCTTTGCCTTCTAATTCTTTTGTTTAGGAGTTACAGAACCAGACATTAG 1842 0.4072 MVIPMELPLQQLHSHGPKMSYNIEAKNLSYKLCSQFDKYKREFFGWESKSDGKFILKDVNCEARSAEITAIAGPSGAGKTTLLEILGGRISPREFSGEVLVNNRSIINQSFVRKYGYVAQDDALFPLLTVKETLMYAALLRLPGGRKVAAARVAELMKVLALEHVADSRIGSMSNRGVSGGERRRISIGVDLVHDPSVVFIDEPTSGLDSASALNVVLLLRRLAANQGKTIVVTIHQPGYRILELIDHFVLLSNGYVMHNGPLNLLQEKLIFAGHHIPDHVNVLEFAIDMIGSLYIDYADTMRQKCVLTDEHKGEIRNINNSEEEVVFYPNSRIIETTILGQRFCKNIFRTNQLFATRVIQALVAGFVLGTIFLNVGREQGEVALQTRTGFFAFSLTFLLSSTTEGLPIFLQERRILMSETSKGAYRISSYVLANTLVFLPFLLMVGLLYTIPVYWLVGLRNSIDGFLYYSLVVWMVISTSNSFVSCFSALVPNFIMGTSVIAGLMGSFFLFSGYFISKKNIPNYWIFMHYMSLFKYPFECFMINEYGGEQGRKHCIQLENGKCSMTGAHFLTQHGLKESQKWTNLLVMLGFIVGYRVLCLLILLFRSYRTRH* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00327 613 Pfam ABC transporter 56 206 IPR003439 GO:0005524
Pte17g00327 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 269 IPR027417 -
Pte17g00327 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 599 - -
Pte17g00327 613 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Pte17g00327 613 SMART AAA_5 65 255 IPR003593 GO:0016887
Pte17g00327 613 Pfam ABC-2 type transporter 338 547 IPR013525 GO:0016020|GO:0140359
Pte17g00327 613 FunFam ATP-binding cassette transporter 46 272 - -
Pte17g00327 613 Gene3D - 22 273 IPR027417 -
Pte17g00327 613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 279 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00327 Pte-Chr17 4299329 4301170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00327 15 261 Calmodulin-binding Proteins AT2G36910 28.125 2.65e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00327 K05681 - qsa:O6P43_029169 870.922