Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00311 ATGAGGAAGAAGCTAGATACTCGTTTTCCTGCCGCTAGAATCAAGAAAATTATGCAATCTGATGAGGATGTGGGGAAGATTGCAATGGCTGTACCTCTTCTTGTTTCTAAAGCACTGGAGCTGTTTCTGCAAGATCTGTGTGACCGGACTTATGAGATAACCTTGAGAAGGGGGGCAAAGACTATGAACTCTTTTCATTTAAAACAATGTGTCCAAAATTTCAATGTGTTCGATTTTCTGAGGGATATTGTTAGCAAGGTTCCTGATTTGGGCGGTTCTCCAGCTGCATCTGACGATCACACTGTCACTAAAAGAAGGAAAGTTGTCAACAATGAACCACATCTCAGTGATGATGAATTAAGGAGAAAGAAAATGCATGAAGCTGCACGTAACGGTTGCAGTGGCCGAGGAAGAGGCAGAGGTAGGGGCCGTGGACGAGGCAGTAGAACGCAAGACAGGCATCTATCATCTCACAATGATAACTGTGAAGATGGTTTTGACAAGATGCATCAGAATGGTTATAGAAGCGTCGAAAGCCTACACAATGGGACCACAAATGGTGCAGACAAGGAGAATCTACAGGAAAGAAGTACAGGAGTTGTGCGGGACTTTGACTTGAATCTGGATTTAGATGAAGATGGGAATTCACCACCGGTAGCTGCAGAAGTGAAAAATGAAAAAAATTCAGGCACTGCACCGTCACATTTGGCTACTGACATGAAGCACGAGGAATTGCCTGGTTGGTCCTTGTCTGATATGGAAAAGATGGATATTGATCCTATTCAATTTACTAATTTAAATGGAGGGATACATGAAGATGAGGAAGATTACGATGCAGAAGCCTAG 846 0.4303 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQNFNVFDFLRDIVSKVPDLGGSPAASDDHTVTKRRKVVNNEPHLSDDELRRKKMHEAARNGCSGRGRGRGRGRGRGSRTQDRHLSSHNDNCEDGFDKMHQNGYRSVESLHNGTTNGADKENLQERSTGVVRDFDLNLDLDEDGNSPPVAAEVKNEKNSGTAPSHLATDMKHEELPGWSLSDMEKMDIDPIQFTNLNGGIHEDEEDYDAEA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00311 281 FunFam dr1-associated corepressor homolog 1 86 - -
Pte17g00311 281 MobiDBLite consensus disorder prediction 178 197 - -
Pte17g00311 281 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 117 - -
Pte17g00311 281 MobiDBLite consensus disorder prediction 145 169 - -
Pte17g00311 281 MobiDBLite consensus disorder prediction 91 169 - -
Pte17g00311 281 MobiDBLite consensus disorder prediction 178 193 - -
Pte17g00311 281 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Pte17g00311 281 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Pte17g00311 281 MobiDBLite consensus disorder prediction 99 133 - -
Pte17g00311 281 MobiDBLite consensus disorder prediction 208 241 - -
Pte17g00311 281 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00311 Pte-Chr17 4161681 4165736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00311 1 270 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.098 4.30e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pte17g00311 CBFD_NFYB_HMF 1.3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00311 K21752 - qsa:O6P43_020912 313.153