Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00289 ATGTCATTGCAGAGTTTCAACGGGGATAGTAAGCTGAAGGGTCTCAACTTGACTGGAGTTCTCCCAGATGAATTTGGAAACCTCACTCATCTCCAAGAAATTGAGCTCAGCCGAAATTATTTCAATGGTTCAATCCCCAAAAGTTTCGCAAGCCTTCCTCTTGTGATTCTGTCCCTTTTGGGAAATCGATTTAGTGGCTCAATTCCAAAAGAAATTGGTAATATTGCCAGTCTGCAACAGCTGGTATTGGAAGATAATCAGTTTGGAGGAACACTTCCGCCAAGCCTTGGAAATTTGAGGAATCTACAAAGACTACTTCTCTCAGCGAATAATTTCACAGGGAGAATACCAGAATCATATGGCAATTTAAAGAACATAACAGACTTTCGGATAGATGGGAGCAGTCTATCAGGAAAGATACCCGATTTTATTGGAAACTGGACAAAACTTGACAGATTGGACCTGCAGGGTACAAATATGGAAGGCCCAGTTCCTTCTACCATTGCTCTCTTGAAAAGTTTGACTGAGCTGAGAATATCTGATTTGCATGGACCCACCATGAATTTCCCTAACCTCAAGGATATGAAAATTATTGAACGATTGGTACTGAGAAATTGTTTGATTACTGGTCCAATTCCAGACTACATTGGAGGAATGGAGAAATTAAAAGCTCTAGACCTAAGCTTCAACAAGTTGACAGGTGAAATTCCAGATTCAATTCAGGGCTTGAAAAATCTAGATTTCTTGGATTTATCTTACAACAATTTTTCAGATTCATCTGTGTCTAATTGCCAGCTTCATGACGTGAACTTACTTTCTAGTCAATCATCAGATAAGAGCAATGCTTGGGGATACAGCAGCACAGGCGTTTACTTAGGAGACGACAAGGCCAGTCATATAGCCACAAATGCATTTTCTTTGAATATGAGTGGTCCAGAGTACTTCAAGACAGCTAGGCTCTCAGCCTTGTCACTCAAGTACTATGGCTTTTGCATGCTGAAAGGCAGTTACAAATTGAAGCTCCATTTTGCAGAAATAATGTTCACCAATGACACAACGTTCAGCAGTCTTGGAAGGAGAATATTCGATGTCTCAATTCAAGGGACTGTGTATCTGAAGGATTTTAATATAATGGAGAAAGCTGGCGGTGTTGGTAAAGGCACTACTGAGGAATTTGATGTTGAAGTTAATAGTAGCACTTTGGAGATTCATTTATACTGGGCTGGGAAAGGAACGACTGCAATTCCTGACAGAGGCGTTTATGGACCTCTAATATCTGCCATTACTGTCACACCAAACTTCAAAGTTCCTTCAAAAGGGCTGTCAGCTGGAGCAATTGCTGCAATTGTGGCTGGCTCGTGCGTCTTTATTGTTTTGATATTGGGTATGCTTTGGAAGAAGGGTCTCATTGGGGGAAAAGAACCTGAAGACAAAGAACTTCGAGGGCTAGATCTCCAAACTGGTTACTTCACTTTAAGACAAATTAAAGCTGCGACCGATAATTTTAACCCTGTTAACAAGATTGGCGAAGGGGGATTTGGACCAGTGTACAAGGGTGTCTTATCAGATGGTGCTGTGATAGCTATTAAGCAGCTTTCTTCAAAATCAAAGCAAGGAAACCGTGAATTTGTCAATGAGATAGGGATGATTTCTGCTTTGCAGCACCCAAATCTTGTAAAACTTTATGGATGCTGTATCGAAGGAAATCAATTGTTACTGATATATGAATACATGGAGAACAATTGTTTGGCTCGTGCACTCTTTGGCCGTGAAGAACAGAAGCTAGATTTGGATTGGCCTACGAGGAAGAAGATCTGTTTAGGGATAGCTAGAGGACTGGCTTACCTTCACGAGGAATCAAGGCTGAAAATAGTTCACAGAGACATTAAAGCTACAAATGTCTTACTTGACAGGGATCTCAATGCTAAGATTTCTGATTTTGGTTTAGCTAAACTTGATGAAGAAGAGAACACCCATATCAGCACACGGATAGCTGGAACAGTGCCAAAGGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTCCTACAAGAGCAAGGAAACCTTTTGGAATTAGTTGATCCAAGACTTGGTTCTAGCTATTCTCCAGAAGAGGCCAGGAGATTGTTGAACTTGGGACTGTTATGCACCAACCCTTCTCCCACTCTAAGACCGTCCATGTCTTCAGTAGTTAGCATGCTTGATGGGAAAATCCCAGTTCAAGCTCCCATCATCAAGCGCAGTGATTCAAATCCAGATGCAAGATTTAAGGCCTTTGAGATGCTATCATCACACGATAGCCAAACATACATGTCTGGTGCCTTCTCACAAGAGAGTCAAGTGCAAAGAACCATTTCGTCGGATGGACCGTGGTCTGGCTCTTCTGCTTCTCTCCTCAATACGCAGGAGCATTCTTCAACCAGGAAGCTTGTTCAGGATCATTGA 2445 0.4168 MSLQSFNGDSKLKGLNLTGVLPDEFGNLTHLQEIELSRNYFNGSIPKSFASLPLVILSLLGNRFSGSIPKEIGNIASLQQLVLEDNQFGGTLPPSLGNLRNLQRLLLSANNFTGRIPESYGNLKNITDFRIDGSSLSGKIPDFIGNWTKLDRLDLQGTNMEGPVPSTIALLKSLTELRISDLHGPTMNFPNLKDMKIIERLVLRNCLITGPIPDYIGGMEKLKALDLSFNKLTGEIPDSIQGLKNLDFLDLSYNNFSDSSVSNCQLHDVNLLSSQSSDKSNAWGYSSTGVYLGDDKASHIATNAFSLNMSGPEYFKTARLSALSLKYYGFCMLKGSYKLKLHFAEIMFTNDTTFSSLGRRIFDVSIQGTVYLKDFNIMEKAGGVGKGTTEEFDVEVNSSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKVPSKGLSAGAIAAIVAGSCVFIVLILGMLWKKGLIGGKEPEDKELRGLDLQTGYFTLRQIKAATDNFNPVNKIGEGGFGPVYKGVLSDGAVIAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNCLARALFGREEQKLDLDWPTRKKICLGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNAKISDFGLAKLDEEENTHISTRIAGTVPKEEFVYLLDWAYVLQEQGNLLELVDPRLGSSYSPEEARRLLNLGLLCTNPSPTLRPSMSSVVSMLDGKIPVQAPIIKRSDSNPDARFKAFEMLSSHDSQTYMSGAFSQESQVQRTISSDGPWSGSSASLLNTQEHSSTRKLVQDH* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00289 814 SMART serkin_6 502 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00289 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Pte17g00289 814 SUPERFAMILY Protein kinase-like (PK-like) 486 734 IPR011009 -
Pte17g00289 814 Gene3D Ribonuclease Inhibitor 187 268 IPR032675 -
Pte17g00289 814 Gene3D Ribonuclease Inhibitor 3 77 IPR032675 -
Pte17g00289 814 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 116 183 - -
Pte17g00289 814 Gene3D - 269 433 - -
Pte17g00289 814 ProSiteProfiles Protein kinase domain profile. 502 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00289 814 Pfam Malectin domain 300 428 IPR021720 -
Pte17g00289 814 Gene3D Phosphorylase Kinase; domain 1 472 577 - -
Pte17g00289 814 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 471 577 - -
Pte17g00289 814 MobiDBLite consensus disorder prediction 785 806 - -
Pte17g00289 814 Pfam Protein kinase domain 504 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00289 814 Pfam Leucine rich repeat 199 256 IPR001611 GO:0005515
Pte17g00289 814 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 669 765 - -
Pte17g00289 814 SUPERFAMILY RNI-like 12 273 - -
Pte17g00289 814 Gene3D Ribonuclease Inhibitor 87 186 IPR032675 -
Pte17g00289 814 MobiDBLite consensus disorder prediction 785 814 - -
Pte17g00289 814 Gene3D Transferase(Phosphotransferase) domain 1 670 751 - -
Pte17g00289 814 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 262 433 - -
Pte17g00289 814 FunFam Leucine-rich repeat receptor protein kinase EMS1 9 95 - -
Pte17g00289 814 FunFam Os07g0541700 protein 578 667 - -
Pte17g00289 814 Gene3D Transferase(Phosphotransferase) domain 1 578 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00289 Pte-Chr17 3965770 3973782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00289 11 797 Receptor kinase-like Gene Family AT1G53440 57.675 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte17g00289 Pkinase 1.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00289 - - qsa:O6P43_001071 1137.48