Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00286 ATGAAGATTCAGTGTAACGTTTGTGAGGCAGCAGAGGCTAAGGTCTTGTGTTGTGCAGATGAGGCAGCTTTGTGTTGGGAATGTGACAAGAAGATTCATGCTGCTAACAAGCTTGCAAGTAAGCACCAGAGGGTTCCATTATCGGCCTCTTCATCTCAGATGCCAAAGTGCGATATCTGTCAGGGTCACTTTGAGGCAGGGAGTCATTTCCTGGAAGTTAGGTTATCTCTTATACCAGGACCACACTTTGTTGCTGTCATGTCTCAGTAG 270 0.463 MKIQCNVCEAAEAKVLCCADEAALCWECDKKIHAANKLASKHQRVPLSASSSQMPKCDICQGHFEAGSHFLEVRLSLIPGPHFVAVMSQ* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00286 89 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte17g00286 89 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pte17g00286 89 CDD Bbox1_BBX-like 5 47 - -
Pte17g00286 89 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 61 - -
Pte17g00286 89 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00286 Pte-Chr17 3939798 3940835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00286 1 71 C2C2-CO-like Transcription Factor Family AT1G78600 80.282 1.17e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte17g00286 zf-B_box 6.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00286 - - qsa:O6P43_001094 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00286 17 3939798 3940835 Pte17g00286 17 3939798 3940835 RCT