Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00284 GCCTTTTATATAACAATATGTGTCGTTGCCTTTGTGTCATCTAAGATCATCATTTCTGTCCTCCTTTACAAAAGATGGAAAAGAAAGCAGATGGTTCATGTAGATGGCATCTCAAGGAGATATATTATTGGTAAAAAACTGAGCAACAAGGACATCATAGGTTCTGGGGGTTATGGAATCGTTTACAAATTGACTGTGGATGACTCCACAGCCTTTGCAGTGAAAAGACTGAACAGAGGGACTGCAGATAGAGACCGAGGGTTTGAGAGAGAGTTGAAAGCCATGGCAGACATTAAGCACCGTAACATTGTGACTCTTCATGGATATTACACTGCCATCCACTATCATCTTCTTATCTATGAGCTAATGCCAAATGGAAGCTTAGATGCCATTTTGCACGTTTTGGATTGGTCATCCAGATATAAAATAGCAGTAGGTGCAGCAAGAGGAATATCATACCTTCATCATGATTGCATTCCTCACATAATCCACAGAGATATCAAGTCAAGCAATATATTGCTGGATCAGAATATGGAAGCTCGAGTTTCTGATTTTGGACTAGCCACATTGATGGAACCTGATAAAACTCATGTTTCAACATTTGTTGCTGGAACTTTTGGATATTTGGCTCCAGAATATTTTGATACAGGAAGAGCAACAACAAAAGGGGATGTGTATAGTTTTGGGGTGGTGTTACTGGAACTTTTAACAGGGAAGAAACCTACTGACGAAGTTTTCATGGAAGAAGGAACAAAACTTGTCACATGGGTTAAGGCAGTTATTGAAGGGAAGAGAGAGGATCAAGTACTTGACAGTAGTTTAGAGGATTGCCTTTGCGCAGTTGATGAGGTTAACAATGTATTTAACATAGCATTTATGTGCCTTGAACCAGAACCTTCAAATAGGCCAACCATGGCAGAAGTGGTCGATATGCTTCAACACACAAAA 948 0.3977 AFYITICVVAFVSSKIIISVLLYKRWKRKQMVHVDGISRRYIIGKKLSNKDIIGSGGYGIVYKLTVDDSTAFAVKRLNRGTADRDRGFERELKAMADIKHRNIVTLHGYYTAIHYHLLIYELMPNGSLDAILHVLDWSSRYKIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPDKTHVSTFVAGTFGYLAPEYFDTGRATTKGDVYSFGVVLLELLTGKKPTDEVFMEEGTKLVTWVKAVIEGKREDQVLDSSLEDCLCAVDEVNNVFNIAFMCLEPEPSNRPTMAEVVDMLQHTK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00284 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Pte17g00284 316 Pfam Protein kinase domain 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00284 316 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 123 316 - -
Pte17g00284 316 SUPERFAMILY Protein kinase-like (PK-like) 37 313 IPR011009 -
Pte17g00284 316 Gene3D Phosphorylase Kinase; domain 1 39 122 - -
Pte17g00284 316 FunFam Receptor-like serine/threonine-protein kinase 15 122 - -
Pte17g00284 316 PIRSF ILK 37 316 - -
Pte17g00284 316 ProSiteProfiles Protein kinase domain profile. 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00284 316 SMART serkin_6 47 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00284 316 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pte17g00284 316 Gene3D Transferase(Phosphotransferase) domain 1 123 316 - -
Pte17g00284 316 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 14 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00284 Pte-Chr17 3924502 3926077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00284 45 313 Receptor kinase-like Gene Family AT2G35620 51.648 1.50e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pte17g00284 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00284 - - cave:132175212 511.916