Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00266 ATGGCGGCTGCAGTAGTAGCGGAGCCAAAGAAGCACCCTCGACCGGGGCGAGGCGGATTCGAAGCACATGGGTTGACAGATGAGGAAGCTAGGGTCCGGGCTATAGCTGAGATCGTTAACTCCATGGTGGAGATTTCCCGAAAAGGGAAGGACGTCGATTTGAATGCACTCAAATCTGCTGCTTGCCGTAAGTATGGTCTCTCACGTGCTCCTAAGCTTGTCGAAATGATTGCGGCTCTGCCGGACGCAGAGCGGGACTCGCTTCTTCCGAAGCTCCGAGCGAAACCAGTCCGAACAGCCTCTGGTATCGCCGTGGTTGCTGTCATGTCGAAGCCTCACCGCTGTCCTCACATTGCGACAACTGGGAATATATGCGTATACTGTCCTGGAGGACCCGATTCGGACTTTGAATATAGTACTCAATCTTATACTGGATACGAACCCACCAGTATGCGAGCAATTCGAGCCAGGTATAACCCGTATGTGCAAGCAAGGAGCAGGATAGACCAACTTAAAAGATTGGGTCACAGTGTTGATAAGGTTGAGTTCATCTTGATGGGCGGAACATTTATGTCACTGCCAGCAGATTATCGTGACTACTTCATAAGGAATCTTCACGATGCTTTATCTGGGTACACTTCTGCAAATGTAGAAGAAGCGGTAGCATACTCTGAGCATGGTGCAACAAAGTGCATTGGGATGACCATTGAAACGAGGCCAGATTATTGCCTTGGGCCTCATTTGAGACAAATGCTCTCTTATGGATGCACGAGATTGGAGATTGGAGTTCAAAGCACATATGAGGATGTTGCTCGTGACACTAATAGAGGACATACTGTGGCTGCAGTAGCTGATTGCTTTTGCTTAGCAAAAGATGCTGGTTTCAAGGTCGTAGCACACATGATGCCTGATCTTCCCAACGTAGGTGTAGAAAGAGATTTGGAAAGTTTTAGAGAATTCTTCGAGAGTCCTTCTTTTAGAGCAGATGGCCTTAAAATATATCCTACTCTTGTAATTCGTGGAACTGGACTTTATGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCACCTGAACAACTTGTGGACATTATAGCAAGGATCCTTGCCATGGTACCACCATGGACACGTGTTTATAGAGTTCAACGTGATATTCCAATGCCTCTTGTTACTTCTGGTGTTGAAAAAGGTAATCTAAGGGAGCTAGCTTTGGCGAGGATGGAAGACTTGGGCTTGAAATGTCGTGATGTTCGGACACGAGAAGCAGGAATCCAGGATATTCACCATAAAATCAAACCAGAAGAAGTTGAGCTCGTTCGTCGTGATTATGTGGCAAATGAAGGTTGGGAAACATTTCTGTCATACGAAGACACGAAGCAGGACATTCTTGTTGGTTTATTGCGGTTACGAAAATGTGGAAGGAATACCACCTGTCCAGAACTTATGGGCAAGTGTTCCATTGTTCGAGAACTTCATGTGTACGGAACTGCTGTACCAGTTCATGGGCGAGATGCAGACAAGTTGCAACACCAGGGTTACGGTACGCTGCTTATGGAGGAGGCAGAGCGAATTGCACGCAAGGAGCATAGATCAAATAAGATAGCTGTAATTTCTGGCGTCGGTACACGCCACTATTATAGGAAGTTGGGTTATGAGCTTGAAGGCCCTTACATGGTAAAATATCTTGCTTGA 1692 0.4645 MAAAVVAEPKKHPRPGRGGFEAHGLTDEEARVRAIAEIVNSMVEISRKGKDVDLNALKSAACRKYGLSRAPKLVEMIAALPDAERDSLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGYTSANVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYVANEGWETFLSYEDTKQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHRSNKIAVISGVGTRHYYRKLGYELEGPYMVKYLA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00266 563 Gene3D - 414 563 - -
Pte17g00266 563 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 412 563 IPR000182 GO:0016747
Pte17g00266 563 MobiDBLite consensus disorder prediction 10 24 - -
Pte17g00266 563 PIRSF HAT_Elp3 20 563 IPR034687 -
Pte17g00266 563 MobiDBLite consensus disorder prediction 1 24 - -
Pte17g00266 563 FunFam Elongator complex protein 3 411 563 - -
Pte17g00266 563 Pfam Radical SAM superfamily 123 317 IPR007197 GO:0003824|GO:0051536
Pte17g00266 563 NCBIfam tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 50 562 IPR034687 -
Pte17g00266 563 SUPERFAMILY Radical SAM enzymes 135 374 - -
Pte17g00266 563 SFLD Radical SAM 53 562 IPR007197 GO:0003824|GO:0051536
Pte17g00266 563 SFLD ELP3-like 53 562 IPR034687 -
Pte17g00266 563 SMART MiaB 105 367 IPR006638 GO:0003824|GO:0051536
Pte17g00266 563 CDD Radical_SAM 112 359 - -
Pte17g00266 563 Pfam Radical_SAM C-terminal domain 329 408 IPR032432 -
Pte17g00266 563 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 22 562 IPR039661 -
Pte17g00266 563 Pfam Acetyltransferase (GNAT) family 415 551 IPR000182 GO:0016747
Pte17g00266 563 ProSiteProfiles Radical SAM core domain profile. 98 388 IPR007197 GO:0003824|GO:0051536
Pte17g00266 563 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 304 558 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pte17g00266 Radical_SAM 1.9e-17 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00266 K07739 - qsa:O6P43_022596 1092.41