Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00254 ATGGCGGATGAAGTGATACTGCTGGATTTTTGGTCAAGCCCATTTGGTATGAGGGTGAGGATTGCTTTGGCTGAAAAGGGCATCGAATATGAACCAAGGGAAGAAGACTTGAGCAACAAGAGTCCCCTCCTCCTCGAGATGAACCCTATCCACAAACAAATTCCTGTTCTCATTCACAAAGGGAGACCCGTATGTGAATCCCTCATAATAGTTCAGTACATCGACGAAGTCTGGAATCACAAGTCACCCTTTTTGCCTACTGATCCTTACCAACGTGCCAATGCAAGGTTTTGGGCTGACTACGTTGACAAGAAGATATACTCTGCAGGGCGTTTGGTGTGGGGGACAACAGGTGAGGTGCAAGAAGCTGCAAAGAAGGAACTGATAGAGTGCTTCAAGGTGTTAGAAGGAGAGCTTGGAGAGAAAACTTTCTTCGGGGGTGAGACATTTGGATTGGTAGATGTGGCACTGATTCCTTTCCACAGCTGGTTCTATGGGCTTGAGACCTCAGGAAACATCAGCCTGATAGATGAGTGTCCGAAATTTGTTGCTTGGGCAAAGAGGTGCATGCAGAGGGAGACGTTTTTAGTGTTAACTATGGCAGAAGAATTGACTTTGTTGAGCGTCTGGTTAAGCCCATTTGGCTTAAGAGTGCAGATTGCTTTAGCTGAGAAAGGAATACAATATGAGAAGAAAGAAGAAGATATGCGTAACAAGAGCCCTCTTTTGTTGAAGATGAACCCGGTAAGCAAGCAAATCCCAGTTCTGATTCACAACGGAAGACCCATATGTGAATCAATGATAATTGTTGAGTACATCGACGAGGTCTGGAACCACAAATCTCCATTACTGCCTGCTGATCCTTACAAGAGAGCCAACGCAAGGTTTTGGATTTATCCTAATGCTTCCAAGTTATGGTCGAACCATGGTGATGCTCATGAAGAAGCTAAGAGAGAACTCTTGGGATGCTTCAAGGTGTTGGAAGGAGAGCTTGGAAACAAGGATTATTTTGGGGGTGAGTCATTTGGGTTGGTAGATGTGGCTTTGATCCCATTCTACGGCTGGTTCTATACACTAGAAAAGTTTGGGTTGAAGATGGGTGAGGAATGTCCAAAGCTTGTGGCTTGGGGCAAGAGATGCATGGAGAGAGAGAGTGTGGGAAAGACATTGCCTGATCAGCAGAAAGTGTATGAATTCATAGTGGAGCGTTGGAAGAAGCAAGAGGGGCAGAAGAAGTGA 1239 0.4536 MADEVILLDFWSSPFGMRVRIALAEKGIEYEPREEDLSNKSPLLLEMNPIHKQIPVLIHKGRPVCESLIIVQYIDEVWNHKSPFLPTDPYQRANARFWADYVDKKIYSAGRLVWGTTGEVQEAAKKELIECFKVLEGELGEKTFFGGETFGLVDVALIPFHSWFYGLETSGNISLIDECPKFVAWAKRCMQRETFLVLTMAEELTLLSVWLSPFGLRVQIALAEKGIQYEKKEEDMRNKSPLLLKMNPVSKQIPVLIHNGRPICESMIIVEYIDEVWNHKSPLLPADPYKRANARFWIYPNASKLWSNHGDAHEEAKRELLGCFKVLEGELGNKDYFGGESFGLVDVALIPFYGWFYTLEKFGLKMGEECPKLVAWGKRCMERESVGKTLPDQQKVYEFIVERWKKQEGQKK* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00254 412 SUPERFAMILY GST C-terminal domain-like 76 196 IPR036282 -
Pte17g00254 412 CDD GST_C_Tau 89 194 IPR045074 GO:0004364|GO:0006749
Pte17g00254 412 FunFam Tau class glutathione S-transferase 199 286 - -
Pte17g00254 412 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Pte17g00254 412 Pfam Glutathione S-transferase, N-terminal domain 203 275 IPR004045 -
Pte17g00254 412 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Pte17g00254 412 SUPERFAMILY GST C-terminal domain-like 275 405 IPR036282 -
Pte17g00254 412 SFLD Main (cytGST) 2 194 - -
Pte17g00254 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 287 399 IPR010987 -
Pte17g00254 412 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 194 IPR045073 -
Pte17g00254 412 FunFam Tau class glutathione S-transferase 1 87 - -
Pte17g00254 412 SUPERFAMILY Thioredoxin-like 204 303 IPR036249 -
Pte17g00254 412 CDD GST_N_Tau 204 277 - -
Pte17g00254 412 CDD GST_N_Tau 5 78 - -
Pte17g00254 412 Gene3D - 88 204 - -
Pte17g00254 412 Gene3D - 287 409 - -
Pte17g00254 412 CDD GST_C_Tau 288 403 IPR045074 GO:0004364|GO:0006749
Pte17g00254 412 SFLD Glutathione Transferase (cytosolic) 200 407 IPR040079 -
Pte17g00254 412 Gene3D Glutaredoxin 1 87 - -
Pte17g00254 412 Gene3D Glutaredoxin 205 286 - -
Pte17g00254 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 242 IPR010987 -
Pte17g00254 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Pte17g00254 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 202 281 IPR004045 -
Pte17g00254 412 Pfam Glutathione S-transferase, C-terminal domain 313 384 IPR004046 -
Pte17g00254 412 Pfam Glutathione S-transferase, C-terminal domain 119 193 IPR004046 -
Pte17g00254 412 SFLD Main.3: Omega- and Tau-like 2 194 IPR045073 -
Pte17g00254 412 SFLD Main.3: Omega- and Tau-like 200 407 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00254 Pte-Chr17 3380713 3390411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00254 200 406 Glutathione S-transferase Gene Family AT1G17180 56.279 6.05e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00254 K00799 - cave:132171408 521.546