Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00251 ATGGTAAAACAATCGAATTGCAAACTACAGAAGCTGTTTCATTTGACACTTATCATGTGTTGTGTAAGTGTTCTTGTTGAGTCAATTAATGAGGAGGGTACTTCCCTTTTGGTGTTTAAAGGGTCTCTTTTTGATCCCAACAACAATCTTATAACCTGGAATTCCTCAGATTCAACTCCTTGTAATTGGACTGGCGTGCAGTGCACTGATCTGATGGTAACTTCTTTACATATCAGTGGCCTTAATTTATCTGGCACTTTATCACCAGTAATTTGTAACCTTCCTAGATTAGTTGAGTTGAATCTGTCAACTAATTTCATCTCTGGTCCCATTCCTGTAGATTTTGTTCAATGTCATAATCTAGAGGTTCTGGACTTCTCCACTAACAGGTTAAGTGGGGAATTACTCACCCCATTATGCAAAATTTCCAGACTGAGAAAGCTTTACCTGAGTGAAAACTATATGCATGGTGAAATACCTGAGGGGATTGGGAATTTAGCATCACTAGAGGAGCTAGTCATTTACAGCAATAACCTGACAGGAGGAATTCCGACATCAATTAGCAAGTTGAAGCAGCTTAAGATCATCAGGGCAGGGCGGAACGCGCTCTCTGGTCCGATCCCATTGGAGATTAGTGAATGTGAGAGCTTAAAGGTTTTAGGGCTGGCACAGAATCAGTTACATGGTTCTTTTCCAAGGGAGCTTCAGAAACTTCAGAATCTCACTGATTTGATACTTTGGCAAAATTTTTTATCAGGTGAAATACCTGCTGAAATAGGAAATATGAGTAACCTGGAAGTCATTGCATTGAATGGAAATTCATTTACCGGAATTATTCCCAAAGAGTTGGGGAAACTGTCCAAGTTGAAGAGGTTGTATATATATACCAATCAATTGAATGGAACATTTCCTGCAGAACTGGGGAGCTGCATAAATGCTCTGGAAATAGATTTATCCGAAAATCGATTGACTGGATTGATTCCCAGAGAGTTAGGTCAAATTTCAGGTCTCACGTTGCTTCATCTATTTGAAAATCTGCTGCAAGGACCAATCCCGTTGGAGCTGGGACAATTGACATATCTGCAGAACTTGGACTTGTCAATAAATAACTTGACAGGTAAGATACCACAAGAATTTCAGGATCTTACACATTTGGTGGAGTTACAGCTATTTGACAATCACCTTGAAGGTCACATACCGCGCCACCTTGGAGCTAGCACCAATCTCACTATCCTTGATATATCTGCAAATAATCTTGTTGGTCCTATTCCTCCTCATCTTTGTAGGTATGGGAGACTTCAATTTCTCAGTCTTGGGTCAAACAAGTTATTAGGAAATATCCCATATGACTTGAAAACATGCAAGTCACTTGTGCAGCTGATGTTGGGAGATAACCAACTTACAGGAATCCTCCCGGTTGAATTATTTGAACTTCATAATCTCTCAGCACTTGAGCTTTATCAGAATCGCTTTTCCGGGCCAATAAAGCCAGAGGTGGGGCGACTTTTTAATCTGGAAAGACTCCTTTTGTCAGCTAACTATTTTGTTGGAACACTTCCTTCTGAGATTGGAAATCTTAGGAAACTTGCAGCTTTCAATGTTTCAGCTAATTGGCTGACAGGAAGTATTCCTCATGAGTTAGGAAATTGCTCAAAACTACAAAGGCTTGATCTTAGCAGGAATCAGTTTGAAAACAATCTTCCAGATGAAATTGGTAATCTTGTGAATCTGGAAAGATTGAAGCTTTCCGATAATAGATTGACTGGAGTCATACCGAGCTCTCTGGGGAATCTTACTAGGCTCACAGAACTGCAACTTGGTGGAAACCAATTTTATGGAAGTATCCCGTTTCATGTTGGACAACTTACTTCTCTTCAAATTTCCCTTAACATCAGCTACAACAAACTTTCTGGGAAAATTCCTGATAATCTGGGAAATTTACAGATGTTGGAGTCACTTTATTTAAACAACAACCAGCTTGTCGGAGAAATTCCTGCATCCATAGGTGAGCTGCTAAGCTTGCAAATTTGCAATGTTTCTAACAACAACCTGGTAGGTGTAATTCCAAACACTCCCGCATTTAGTAGAATGGATATCACAAATTTTGCTGGAAACAACGGCTTGTACAGGATGGATTCAGAAAACTCCCATCCATCCTTAGCTCCATTTACAAAAGCAAGCTCAAGGAAACAAAGCTCATTAAGGGAGAAAATTGTGGTCGGTGTTTCTTCTGTGATCGGTTTTGTCTCATTTGTGTTTATCATTTTAATATGTTACGCAATGAAACGTCGCAGTCAGAAATTTGTCTCACTTGAAGAGTGGAAAAATGATGATTCATTAGATAGCTACTACTTCCCAAAAGAAGGTTTCAAGTACAAGGATATCTTAGATGCTACAGGGAACTTTTCTGAAGATGCAACTATTGGAAGAGGTGCATGTGGTACTGTCTACAAGGCTGTCATGGCAGATGGTAAGGTAATTGCAGTAAAGAAGCTGCATTCCCATGGAGAAGGAATAAATGTTGATAGAGGTTTCCGTGCAGAGATTTCCACCCTTGGAAAGATCAGGCATCGAAATATTGTCAAGCTTTTTGGATTTTGCTTTCATGAGGACTCTAATCTACTCTTGTATGAGTACATGGACAATGGCAGCCTGGGGGAGCAACTCCGTAGAAATCAAGAAACCAGCTTGCTCGATTGGAATACTCGGTACAAAATTGCTCTTGGAGCAGCAGAAGGATTGAGCTATCTTCACAATGATTGTAAGCCTCAAATTATTCACCGTGATATCAAGTCAAACAACATATTGCTAGATAAAGCTCTTCGGGCTCATGTAGGAGACTTTGGCTTAGCAAAATTCATTGACTACTCGTACTCGAAATCCATGTCTTCTGTTGCTGGCTCATATGGTTACATTGCCCCCGAATATGCATACACTATGAGGGTAACTGAGAAATGCGACGTATATAGTTTTGGGGTAGTTCTGCTGGAACTGCTCACTGGAAAATCACCTGTTCAACCTCTGGACCAGGGTGGTGACCTTGTAACCTGGGTGAGAAGATCGATTCATAATGCAGTACCAACATCCGAAATATTTGACAAGAGATTGGACTCAGACATGGAGAAGAGTCCGAAGATAATGGATGAGATGTCTTTAGTTCTTAAGATTGCATTGTTTTGCACCAGCACTTCCCCACTCAATAGGCCAACCATAAGAGAAGTCATTGCTATGATGATTGATGCCAAGGAGTCTGTCAGCAACTGTCCATCTTCTCCTACATCTGAATCAGCTATGGATGAAGATTCTTCAAGAGATTATGAGGAATCGTAG 3330 0.4036 MVKQSNCKLQKLFHLTLIMCCVSVLVESINEEGTSLLVFKGSLFDPNNNLITWNSSDSTPCNWTGVQCTDLMVTSLHISGLNLSGTLSPVICNLPRLVELNLSTNFISGPIPVDFVQCHNLEVLDFSTNRLSGELLTPLCKISRLRKLYLSENYMHGEIPEGIGNLASLEELVIYSNNLTGGIPTSISKLKQLKIIRAGRNALSGPIPLEISECESLKVLGLAQNQLHGSFPRELQKLQNLTDLILWQNFLSGEIPAEIGNMSNLEVIALNGNSFTGIIPKELGKLSKLKRLYIYTNQLNGTFPAELGSCINALEIDLSENRLTGLIPRELGQISGLTLLHLFENLLQGPIPLELGQLTYLQNLDLSINNLTGKIPQEFQDLTHLVELQLFDNHLEGHIPRHLGASTNLTILDISANNLVGPIPPHLCRYGRLQFLSLGSNKLLGNIPYDLKTCKSLVQLMLGDNQLTGILPVELFELHNLSALELYQNRFSGPIKPEVGRLFNLERLLLSANYFVGTLPSEIGNLRKLAAFNVSANWLTGSIPHELGNCSKLQRLDLSRNQFENNLPDEIGNLVNLERLKLSDNRLTGVIPSSLGNLTRLTELQLGGNQFYGSIPFHVGQLTSLQISLNISYNKLSGKIPDNLGNLQMLESLYLNNNQLVGEIPASIGELLSLQICNVSNNNLVGVIPNTPAFSRMDITNFAGNNGLYRMDSENSHPSLAPFTKASSRKQSSLREKIVVGVSSVIGFVSFVFIILICYAMKRRSQKFVSLEEWKNDDSLDSYYFPKEGFKYKDILDATGNFSEDATIGRGACGTVYKAVMADGKVIAVKKLHSHGEGINVDRGFRAEISTLGKIRHRNIVKLFGFCFHEDSNLLLYEYMDNGSLGEQLRRNQETSLLDWNTRYKIALGAAEGLSYLHNDCKPQIIHRDIKSNNILLDKALRAHVGDFGLAKFIDYSYSKSMSSVAGSYGYIAPEYAYTMRVTEKCDVYSFGVVLLELLTGKSPVQPLDQGGDLVTWVRRSIHNAVPTSEIFDKRLDSDMEKSPKIMDEMSLVLKIALFCTSTSPLNRPTIREVIAMMIDAKESVSNCPSSPTSESAMDEDSSRDYEES* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00251 1109 Gene3D Ribonuclease Inhibitor 403 719 IPR032675 -
Pte17g00251 1109 FunFam Predicted protein 183 281 - -
Pte17g00251 1109 Pfam Leucine Rich Repeat 576 598 IPR001611 GO:0005515
Pte17g00251 1109 Gene3D Phosphorylase Kinase; domain 1 763 879 - -
Pte17g00251 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Pte17g00251 1109 SMART LRR_typ_2 647 671 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 238 262 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 358 381 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 454 478 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 502 526 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 550 573 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 286 310 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 598 622 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 142 166 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 574 597 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 382 406 IPR003591 -
Pte17g00251 1109 SMART LRR_typ_2 94 118 IPR003591 -
Pte17g00251 1109 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 880 1095 - -
Pte17g00251 1109 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Pte17g00251 1109 SUPERFAMILY RNI-like 369 686 - -
Pte17g00251 1109 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 305 403 - -
Pte17g00251 1109 SUPERFAMILY L domain-like 31 310 - -
Pte17g00251 1109 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 29 182 - -
Pte17g00251 1109 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 719 - -
Pte17g00251 1109 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 484 1078 - -
Pte17g00251 1109 Pfam Leucine rich repeat 240 299 IPR001611 GO:0005515
Pte17g00251 1109 Gene3D Ribonuclease Inhibitor 28 198 IPR032675 -
Pte17g00251 1109 Gene3D Ribonuclease Inhibitor 199 402 IPR032675 -
Pte17g00251 1109 Gene3D Transferase(Phosphotransferase) domain 1 880 1101 - -
Pte17g00251 1109 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 879 - -
Pte17g00251 1109 MobiDBLite consensus disorder prediction 1085 1109 - -
Pte17g00251 1109 ProSiteProfiles Protein kinase domain profile. 802 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00251 1109 SMART serkin_6 802 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00251 1109 Pfam Protein kinase domain 803 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00251 1109 SUPERFAMILY Protein kinase-like (PK-like) 779 1078 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00251 Pte-Chr17 3358715 3365169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00251 52 1090 Receptor kinase-like Gene Family AT1G73080 37.718 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte17g00251 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00251 - - qsa:O6P43_001162 1595.1