Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00248 ATGAAAAATATTTCGCTAATAGGTGATGCTAATCCTCGTTCCAGTGAAAATGGAGGATTTTCTGCGACAAAACAAAGCCTTGAAGGAACAAGTGTCGATTTTGGAGACCCAGTAGGAAGTAACGCTGTTGATGGAAGGTTAATATTGGGATATTCATTAACTTCTCCTGACATAGTCATCTGTGCTGGATCGCCTGATCAATCTGTGAATACCGATTCCCCTGTGTTCTTGAAGAGCAAATCTTACAAGAAAATGGAGTCTTCTGTGGAGATTTCTTTTGAGAATGGATTGAATGGCTCTGTTAAAGCTAACAAAACCAACAGGACCCCGACTGTTAAATTCTCTCATTTGTGTCAGACTTTTACAAGGGAATTATCTCCTGATTCTTCATTTGAGTTACTTCCACCACCTGCAATCAAAGATGAGTCACCTCAAGTTCACACTCCTAAAGAAAATGAAGTCCTAGAGGTTGCAGAAATATCTGAAGAGGCAGAATATGATCCAGTGGAAGATAATGAAGATAATGGTGTGGAAAAATATCAGAGGCTATGTAGATATTTTGAGTCCCAGAAGAAGGAATTAGTAGAAGCAAGGAAGGTGGTGAAAGAACTTAAGAGGGAGAATGAACAAAAGACCCGAGATTGCCAAGAAGCTTGCAAGTCTCTGAAGGAACTTCAAAATGAGCTTATGCGAAAGTCAATGCACGTGGGATCTTTGGCCTTCGCCATTGAGGGTCAAGTGAAAGAGAAAAGCAAGTGGTTTTCATCACTAAGAGACTTAATGAGAAAAGTGAAGATTATGAAAATGGAACACATCAAATTATCAGAGGAGGCACATGCATATAAGAATTTTCTCACAGATATGAAAGAAATGAGCTCAGCCATTCAGTCCAAGATAAGTCAGCAAATAGATTTACAAGAAGGTATGAAGACTAAGTTTATTGAAGGAGCCAAGGAAAGGAAAGAACTGTACAACAAGGTTCTCGAGCTCAGAGGAAACATAAGGGTCTTCTGCCGTTGTAGACCTTTTAATGCTGAAGAAAAAACAGCAGGAGCTACAACAGCGATTGACTTTGAATCTGCTAAAGATGGTGAACTTAATGTAAAATCGAATGGGTCTTTCAGGAAGACCTATAAGTTTGATGCTGTCTTTGGCCCCCAAGCTGACCAAGCTCATGTTTTTGAAGACACAGCTCCATTTGCAGCATCGGTCTTGGATGGATACAATGTATGCATATTTGCCTATGGGCAAACAGGAACAGGGAAGACATTTACAATGGAGGGTAATGAAGAAGCTCGTGGAGTTAATTTTAGAATTCTTGAAAAAATGTTCCAAACCATCCAAGAAAGGAAGAACCTATATCGATACAATGTTTCTGTGAGCGTCTTAGAAGTTTATAATGAGCAAATCCGAGACTTGCTAGTTTCTGGAACTCAGCCAGGAGGAGCTGCTAAAAGGCTGGAAGTGAGGCAAGCTGCTGAAGGAATACACCATGTTCCAGGATTGACTGAGGCACATGTGCACAACATGGCTGAAGTCTGGGAAGTCTTTAAAACTGGAAGTAATGCTAGAGCTGTTGGATCAACCAATGCCAATGAGGATAGCAGCCGATCACATTGCATCCACTCCGTCATGGTCAATGGAGAGAATCTGTTGAATGGAGAATGTACAAGAAGTAAATTGTGGTTGGTGGACCTTGCAGGAAGTGAGCGAGTGGCGAGGACAGAAGTTCAAGGGGAACGATTGAAGGAAACCCAAAATATTAATAGGTCTCTATCTGCTCTTGGTGATGTTATATCGGCTCTTGCAACTAAAAGCCCGCATGTGCCATTCAGGAACTCCAAACTCACACACCTGCTTCAAGACTCTCTAGGAGGAGATTCAAAGACGCTGATGTTTGTACAGATTAGTCCTCACGAAAATGATTTAAGCGAGACACTTTGCTCACTGAACTTTGCTACCAGAGTGAGAGGAATTGAGTTAGGTCCTGCAAAGAAGCAACTAGACACTACTGAGCTGGTGAAGTACAAACAAATTGCTGAGAAAACAAAGCTAGAGGTGAAGAGTAAGGATGTGCAAATCAAGAAGATGGAGGAAACTATCTATGGATTAGAGATGAAAATAAAGGAAAGAGATCCTAAAACTAAAAGTCTGCAAGACAAGGTAAAGGAATTGGAATCTCAACTTCTTATTGAGAGGAAGCTTGCACGTCAGCATGTTGACACAAAGATAGCTGAGCAGCACCAACATATGAAACATCAACAAGAAGAAAAAATTACAGCACAATCAAGATCTGCACTTGCCAATCGACCCCTGCCGAGCCACAAGAATTTTAATGAATCAGAAAATGTTATGTGGGGGAAAGATCAGACAAATTTCACTCGGCCACTTATGGACAACAATAGTTACAATAAAGCTTCAGTGCCATTTATACCATCAGATGGCTCTGTCAAGTACATTGATCCCTCAGAAAAAGAGAACAATCCTGACATTGTTGAGAAACTCCCGATACCGAAAAGAACAGGAAGAGCTTCTATTAGCACAGTGGCATCGCGTGTTCCTGCAGCTATTGCTTCAAGGCGCAACTCTTTGATCCCACTTCCAAGTACACCAGTTAACTTCACCCAGCTTCCGGCACCATTACTAACATTGCCTCCATTGCCAAATGTTCAGAAAGAAGCAGCTGTTGATTCTGAAATCGACTGTGTGCCTGCACAAGCACCTTTTGAGAGTCCAAAAGCATTGAAAAGCGGTGGTAAAAAGATAAGCAGCATACTGAGACGAAGTCTGCAGAGAAAGATTCAGATTAGATCTCCAATGCAGCAGCATACACGGAGAATTGGTGTCAATGTGGGGATGGAGAAGGTAAGAGTCTCCATTGGCAGTCGAGGGAAGATCGCCAACAGGGCCTTAAATGCTAGGCGCTATGGAATTAAAGATATTCAGCAAAAGCAGATTCAAAAAGAAAAGGAAAGAGGGTGGAATGTGTGA 2991 0.4159 MKNISLIGDANPRSSENGGFSATKQSLEGTSVDFGDPVGSNAVDGRLILGYSLTSPDIVICAGSPDQSVNTDSPVFLKSKSYKKMESSVEISFENGLNGSVKANKTNRTPTVKFSHLCQTFTRELSPDSSFELLPPPAIKDESPQVHTPKENEVLEVAEISEEAEYDPVEDNEDNGVEKYQRLCRYFESQKKELVEARKVVKELKRENEQKTRDCQEACKSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLMRKVKIMKMEHIKLSEEAHAYKNFLTDMKEMSSAIQSKISQQIDLQEGMKTKFIEGAKERKELYNKVLELRGNIRVFCRCRPFNAEEKTAGATTAIDFESAKDGELNVKSNGSFRKTYKFDAVFGPQADQAHVFEDTAPFAASVLDGYNVCIFAYGQTGTGKTFTMEGNEEARGVNFRILEKMFQTIQERKNLYRYNVSVSVLEVYNEQIRDLLVSGTQPGGAAKRLEVRQAAEGIHHVPGLTEAHVHNMAEVWEVFKTGSNARAVGSTNANEDSSRSHCIHSVMVNGENLLNGECTRSKLWLVDLAGSERVARTEVQGERLKETQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPHENDLSETLCSLNFATRVRGIELGPAKKQLDTTELVKYKQIAEKTKLEVKSKDVQIKKMEETIYGLEMKIKERDPKTKSLQDKVKELESQLLIERKLARQHVDTKIAEQHQHMKHQQEEKITAQSRSALANRPLPSHKNFNESENVMWGKDQTNFTRPLMDNNSYNKASVPFIPSDGSVKYIDPSEKENNPDIVEKLPIPKRTGRASISTVASRVPAAIASRRNSLIPLPSTPVNFTQLPAPLLTLPPLPNVQKEAAVDSEIDCVPAQAPFESPKALKSGGKKISSILRRSLQRKIQIRSPMQQHTRRIGVNVGMEKVRVSIGSRGKIANRALNARRYGIKDIQQKQIQKEKERGWNV* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00248 996 Coils Coil 680 700 - -
Pte17g00248 996 MobiDBLite consensus disorder prediction 1 32 - -
Pte17g00248 996 SMART kinesin_4 331 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g00248 996 FunFam kinesin-like protein KIN-14R 278 661 - -
Pte17g00248 996 ProSiteProfiles Kinesin motor domain profile. 333 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g00248 996 PANTHER KINESIN-LIKE PROTEIN KLP-3 94 814 IPR027640 GO:0003777|GO:0007018
Pte17g00248 996 Pfam Kinesin motor domain 339 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g00248 996 MobiDBLite consensus disorder prediction 8 30 - -
Pte17g00248 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 696 IPR027417 -
Pte17g00248 996 CDD KISc_C_terminal 331 661 - -
Pte17g00248 996 Coils Coil 257 277 - -
Pte17g00248 996 Coils Coil 187 228 - -
Pte17g00248 996 ProSitePatterns Kinesin motor domain signature. 559 570 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte17g00248 996 Gene3D Kinesin motor domain 328 701 IPR036961 -
Pte17g00248 996 PRINTS Kinesin heavy chain signature 529 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g00248 996 PRINTS Kinesin heavy chain signature 609 630 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g00248 996 PRINTS Kinesin heavy chain signature 560 578 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte17g00248 996 PRINTS Kinesin heavy chain signature 407 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00248 Pte-Chr17 3333960 3338894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00248 320 680 Calmodulin-binding Proteins AT5G65930 41.144 2.05e-78 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00248 K10406 - qsa:O6P43_001163 1363.98