Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00220 ATGTACACAAAGAACGGAACAGCGGAGCGACAAGATGGTGGTAAGCCATGCTTTGATTACAAGGAAACTGATCCAACTGGCCGATATGGTCGATTTGGAGATATCCTTGGAAAAGGAGCTACCAAAACAGTCTACAAAGCAATTGATGAGGTCTTGGGTATTGAGGTAGCATGGAACCAAGTCAAGCTTAATGATTTGCTTCGCAAACCGGAGGATTTGCAGAGGCTTTACTCAGAGGTTCATCTTCTCAGCACACTTGAACATGATTGCATCATTCGATTTTACACCTCGTGGATTGATGTTGATCGCAAGACCTTCAACTTCATTACGGAAATGTTCACATCTGGGACGCTCAGAGAATACAGGAAGAGATATAACCGAGTTGGCATAAGAGCTATCAAGACCTGGGCCCTTCAAATATTAAAGGGTCTTGTCTATCTGCATGGCCATGATCCTCCTGTAATTCATAGAGACTTGAAATGTGATAACATATTTGTCAATGGCCACCTTGGCCAAGTAAAAATTGGTGATCTAGGACTAGCTGCCATTCTCCGTGAATCCCATTTAGCCCACAGTGTCATAGGGACTCCAGAGTTCATGGCACCAGAGCTGTATGAGGAAGAGTATAATGAACTCGTTGATGTCTATTCGTTTGGCATGTGCATGCTGGAGATGTTTACATCTGAATTCCCATATGGTGAATGCACCAATCCTGCACAAATTTACAAGAAAGTGATATCGGGAAAGCTTCCTGCAGCATTCTACCGGGTCGATGACTTGGATGCACAGCAATTCATTGGAAAATGCTTGGCGAAAGCTGCAGATAGACCATCAGCAAATGAATTGTTGCATGATCCCTTTCTTATGTCTGGTAATTCAATTGAGATGGCCAGGTTTGGCATTCAGAAACCATTTTTAAATGAAAAGGAGATGGAGAACCTAGGAATCAGTGAAGCACAGAGGACACAAATGACAATCACTGGGAAGCTAAATCCTGAGGATGATACAATCTTTTTGAAAGTGCAGATTACTGATAGGAATGGTTCTTCTAGGAATATATATTTCCCGTTCGACATGTTTAACGATACCTCCATTGATGTTGCAACGGAAATGGTGAAAGAGTTGGAAATAACTGACTGGGAGCCAATGGAAATTGCAAATATGATTGAGGAGGAGGTATTGGCGCTACTGCCGGAGAGAAGGAAAATGGATAATCCAGAACCTCGCTACATATTTAATTATCAAGATGACGATGATGACGGACCCCACCACCATTTCCGCTCTTTATCTTCATGTTCATCATCACAGGAATCCATGTTAGGGTTAATCAGCTGTTATAAGATTGATGACTCCACAAATGAGTATCATTGGCTCCGAGATGATCCACATGATGATGCAAGTTCAAGAAGTTCATCACAGGAAACATATTCGAATTTACATTATCTGTCAGGAGATGAGCAGGATGGCACTGTGAGTCCAACTATAAGAGATAAACAGCACCTCACGAAGTGTCACAAGTGTACGAGGTTTTGTCCTGGAGAATACAATGAAAGAGGGTCATCTGTAACAAGAAGTTACTCCAAGCAATGCAAAGTATCAGCAGGACCACAGGGAGCTGGTTCTACTAGAATTAAGCGGAGTACAGAAAGTCGTAGATTAACAAGGAACGGGTCACTTGTAGATTTACAGAGTCAGTTGCTTCACAGGTCGTTGGTTGAGGAGGTACACAAGAGACGTTTATTCAAAACTATTGGAGCTGTGGAAAATATTGGGTTTCAGTCACCTATCGAAGTTTCCAGTAAAATACCACAGCCAGTGGCTGGTGTCTGCAGTAAGAGTCCCACAACAATTGGCTCAGAGACGAGGAACTGA 1872 0.4257 MYTKNGTAERQDGGKPCFDYKETDPTGRYGRFGDILGKGATKTVYKAIDEVLGIEVAWNQVKLNDLLRKPEDLQRLYSEVHLLSTLEHDCIIRFYTSWIDVDRKTFNFITEMFTSGTLREYRKRYNRVGIRAIKTWALQILKGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRESHLAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMFTSEFPYGECTNPAQIYKKVISGKLPAAFYRVDDLDAQQFIGKCLAKAADRPSANELLHDPFLMSGNSIEMARFGIQKPFLNEKEMENLGISEAQRTQMTITGKLNPEDDTIFLKVQITDRNGSSRNIYFPFDMFNDTSIDVATEMVKELEITDWEPMEIANMIEEEVLALLPERRKMDNPEPRYIFNYQDDDDDGPHHHFRSLSSCSSSQESMLGLISCYKIDDSTNEYHWLRDDPHDDASSRSSSQETYSNLHYLSGDEQDGTVSPTIRDKQHLTKCHKCTRFCPGEYNERGSSVTRSYSKQCKVSAGPQGAGSTRIKRSTESRRLTRNGSLVDLQSQLLHRSLVEEVHKRRLFKTIGAVENIGFQSPIEVSSKIPQPVAGVCSKSPTTIGSETRN* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00220 623 FunFam probable serine/threonine-protein kinase WNK9 113 293 - -
Pte17g00220 623 SMART serkin_6 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00220 623 CDD STKc_WNK 28 288 - -
Pte17g00220 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Pte17g00220 623 MobiDBLite consensus disorder prediction 531 552 - -
Pte17g00220 623 Gene3D Transferase(Phosphotransferase) domain 1 113 295 - -
Pte17g00220 623 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00220 623 Gene3D - 320 404 - -
Pte17g00220 623 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 21 576 - -
Pte17g00220 623 FunFam Probable serine/threonine-protein kinase WNK1 15 111 - -
Pte17g00220 623 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00220 623 Gene3D Phosphorylase Kinase; domain 1 18 111 - -
Pte17g00220 623 SUPERFAMILY Protein kinase-like (PK-like) 31 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00220 Pte-Chr17 2784875 2789203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00220 19 603 MAP Kinase Kinase Kinase AT5G58350 57.966 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte17g00220 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00220 K08867 - qsa:O6P43_014150 857.055