Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00217 ATGTTCTTAAGTGATCATCTCGTTCAGTTTTCCAAGCCAGAAACGGCTTCAACGACTGGTAGCACTGCTAGCTCTCTTGTAATAGGGGAACGAGATCAATTTGATGCATCAGTTGGTAATGGTGCAGGTTATCAATTGATGGTGTCCCCAGAATCCAATGGGGAGACAGTATCGTCTGCTTGGATGTATTCCTTATCTGAGCAATTGGGGAATGTATCGTCTGACTTGGATGTTGTGGCATTCTCAGATTGTGTTATAGGTCTTTATGACATTGCCAGTGATCAGAGATTTGGTGATGATGGGTTTCAACCAGATCATATGAGTCACTTAGGAGTTGAGTTTAAGCCAGCAGTGGCTTATCCCAGCCCTTCTTCCACCGGAGATAATTACAATTGGGGACTTCAATGTAACTATGAAATGACAACAGTACTGGAGGAATCTCATAAAAAAGTAAACAAATACTCAGAAGAAGAAAGGAAGGAAAAAATCTACCGATATTTGAAGAAGAGAAGTCAAAGAAACTTCAACAAAACCATCAAGTATGCATGCCGGAAAACCCTAGCTGACAGGAGAGTCAGAGTTAGAGGAAGATTTGCAAAGAACAATGCTTCATCTGATCCAGCTGCAGAATTGGCAATGGAAAACAACCACAATCCTCATGAAAATCTGTACTTTGCTGATCAAGTTAATAAGTTACAAGATGAGGAGGATGACTGGCTGCGAGCTGCCATGGCGAATCTGGTTTATCTATGTCAGCCATTCCCGCATGATATATAG 777 0.4157 MFLSDHLVQFSKPETASTTGSTASSLVIGERDQFDASVGNGAGYQLMVSPESNGETVSSAWMYSLSEQLGNVSSDLDVVAFSDCVIGLYDIASDQRFGDDGFQPDHMSHLGVEFKPAVAYPSPSSTGDNYNWGLQCNYEMTTVLEESHKKVNKYSEEERKEKIYRYLKKRSQRNFNKTIKYACRKTLADRRVRVRGRFAKNNASSDPAAELAMENNHNPHENLYFADQVNKLQDEEDDWLRAAMANLVYLCQPFPHDI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00217 258 Pfam CCT motif 159 201 IPR010402 GO:0005515
Pte17g00217 258 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 19 212 IPR045281 GO:0009909
Pte17g00217 258 ProSiteProfiles CCT domain profile. 159 201 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00217 Pte-Chr17 2749207 2750505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00217 141 200 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 4.77e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte17g00217 CCT 1.1e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00217 - - gmx:102660475 168.703