Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00213 ATGGATGTCACTGGTCCAATCCCCGATGAACTATGGACTTTGACTTACCTCACCAATTTGAAGTTGGGACTGAATTACTTGAATGGTAGACTGTCGCCAGCAATAGGAAACCTCTCTGGCATGCAGTACCTGGACATTGGCACCAATTCTTTATCAGGGGAGCTTCCTAAGGAGCTGGGAAATCTTACAAATTTGATAATATTTGGTTTCGGGTCAAACAACTTCAACGGTTCTCTGCCATCGGAGCTTGGGAATCTTGTAAAATTAAAGCAACTCTATTTTGATAGTTCAGGTGTCAAGGGGGAAATTCCTCCAACATTTGCTAATTTGAAGGATATGATGACGATGTGGGCGTCAGATACAAGACTTACCGGAAATATACCTGAATTCATAGGGAATTGGTCTAAGCTTACAGTTCTGAGGTTCCAAGGGAACTCCTTCAATGGCACAATACCACTGTCATTCTCGAATTTGACATCTCTGACAGAACTGAGAATAAGTGGCTTATCTAATGGTAGCTTCCCCCTATCAATTATAAACAACATGAAGTCTTTGAACATCTTAGAACTGAGGAATAACAACATTACAGATAGAATTCCAGCATCCATTGGTCAACTTCAAAATTTGAAACAACTGGACTTGAGCTTCAACAATATAACAGGACAGATTCCAAACTCACTTTTCAATTTGAGCGGACTTACTCATTTGTTTCTTGGAAATAACAGTCTAACTGGAGGTCTTCCTACCAGAAAAAGTTCATCTCTTCTTAATATAGACTTATCATACAACAATTTAGCGGGGAGCTTTCCTTCTTGGGTCAATCAACCGAATTTGCAACTAAACCTGGTTGCCAACAATTTCAGCATAGATAACTCAAACAGCAGTGCATTGCCTTCAGGACTAAACTGTCTTCAGCGAGACTTTCCATGCAATCGCGGTCCTGGAATTTATTATAACTTTGCCATTAAATGTGGTGGTCCACCTATTACATCTTCAAATGGTGTTTTCTTTGAAAATGATAATGCCACACTCGGTCCAGCTTCATATTTTGTGACTGACACAAGTAGGTGGGGAGTTAGCAATGTTGGATACTTTGCTGGAAGCAACAATCCTCAGTATACCAGGACCGTATCAAATCAATTTACAAACACTTTGGATTCTGAGCTTTTCCAAACAGCTAGACTATCTCCTTCTTCATTAAGATACTATGGCCTTGGTCTGGAGAATGGTTATTACAATGTAACCCTGCAATTTGCTGAAACAGTTATTGAGAATACTAACACATGGAAAAGCCTTGGCAAGCGGATGTTTGATATATATCTGCAGGGGAATCTATTGGAAAAGGATTTTGAGATAAAAAAGGAAGCTGGAGGGTCATCTTTTCAAGCTGTCCAAAGGCAATACAGGGTTCAAGTGTCTCAGAACTACCTTGAGATCCATCTGTTTTGGGCTGGAAAAGGGACGTGCTGCATTCCAGCTCAAGGTACTTATGGACCCTTAATTTCAGCAATCAATGCCATTCCAGATTTTCCACCCACAGTTCCTAATACTGCTCCAAATAGTAACAAGAACAAGACTGGTCTTATAGTAGGACTCGCTCTCGGTGTTGGAGTTTTATGCTTTCTGTCTGTCATTTTCATTTTTTTCATTGTTCGAAGGAGAAGGCGGCTTTCCACTCTTGATGAAGAGCTTTTGGGGATAGAAACAAGGCCATACACCTTCAGTTACTCTGAACTTAAAAATGCTACGGATGACTTCAATCCTGCTCACAAGCTTGGGGAAGGAGGATTTGGACCTGTCTACAAGGGAAAACTTAATGATGGAAGAGTAATTGCTGTGAAGCAGCTGTCTGTGGGATCCCATCAAGGAAAGAGTCAGTTTGTTGCTGAAATTGCCACTATATCTGCAGTACAACATCGTAATCTTGTCAAACTGTATGGATGCTGCATTGATGGAGACAAAAAACTACTTGTTTACGAGTACCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGGAAACTAAGTCTGCATCTCAGTTGGGCTACAAGATATGATATATGCTTGGGGGTGGCAAGAGGCCTAGCATATCTTCATGAGGAATCTCGGCTTCGGATAGTACATCGTGATGTGAAGGCCAGTAATATTCTGCTTGATCATGACCTTGTTCCTAAAATATCAGACTTTGGGTTGGCTAAACTCTATGATGACAAGAAGACACATATAAGCACCCGTGTTGCTGGAACCATTGGTTATCTTGCACCTGAATATGCAATGAGGGGGCACCTCACAGAGAAAGCAGATGTGTTCTCCTTTGGTGTTGTGGCTCTCGAGATTGTTAGTGGTAGGCCAAATTCTGATTCAAGCTTGGATGGTGATAAGGTCTATCTTCTAGAGTGGGCTTGGCAGCTGCATGAAAACAACCGTGAACTCGAACTATTAGATCCCAGAATATCAAATTTTAATGAGGAAGAAGTGCGAAGAGTTGTAGGGATATCTCTTTTGTGCACTCAAACATCACCAATATTAAGGCCATCAATGTCAAGAGTGGTGGCAATGCTTTCTGGAGATATTGAAGTAGGAACTGTGACTAACAGGCCTGGTTACTTGACTGACTGGAAATATGATGACGTGACCAGCTTCATGTCTGACGCTGCAACGAAAGCTACTGATTCTAGCTTTAACAATTCTTCAACCAGTGACAGCATGGTTGGTAACCCAGATCGTTCTTCAGCAAATGCTACCAAACCCATGCTTCATAGCAACAACCTTGAGGGTAGGTAA 2784 0.4131 MDVTGPIPDELWTLTYLTNLKLGLNYLNGRLSPAIGNLSGMQYLDIGTNSLSGELPKELGNLTNLIIFGFGSNNFNGSLPSELGNLVKLKQLYFDSSGVKGEIPPTFANLKDMMTMWASDTRLTGNIPEFIGNWSKLTVLRFQGNSFNGTIPLSFSNLTSLTELRISGLSNGSFPLSIINNMKSLNILELRNNNITDRIPASIGQLQNLKQLDLSFNNITGQIPNSLFNLSGLTHLFLGNNSLTGGLPTRKSSSLLNIDLSYNNLAGSFPSWVNQPNLQLNLVANNFSIDNSNSSALPSGLNCLQRDFPCNRGPGIYYNFAIKCGGPPITSSNGVFFENDNATLGPASYFVTDTSRWGVSNVGYFAGSNNPQYTRTVSNQFTNTLDSELFQTARLSPSSLRYYGLGLENGYYNVTLQFAETVIENTNTWKSLGKRMFDIYLQGNLLEKDFEIKKEAGGSSFQAVQRQYRVQVSQNYLEIHLFWAGKGTCCIPAQGTYGPLISAINAIPDFPPTVPNTAPNSNKNKTGLIVGLALGVGVLCFLSVIFIFFIVRRRRRLSTLDEELLGIETRPYTFSYSELKNATDDFNPAHKLGEGGFGPVYKGKLNDGRVIAVKQLSVGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIDGDKKLLVYEYLENKSLDQALFGKLSLHLSWATRYDICLGVARGLAYLHEESRLRIVHRDVKASNILLDHDLVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSDSSLDGDKVYLLEWAWQLHENNRELELLDPRISNFNEEEVRRVVGISLLCTQTSPILRPSMSRVVAMLSGDIEVGTVTNRPGYLTDWKYDDVTSFMSDAATKATDSSFNNSSTSDSMVGNPDRSSANATKPMLHSNNLEGR* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00213 927 SUPERFAMILY L domain-like 4 299 - -
Pte17g00213 927 Gene3D Ribonuclease Inhibitor 2 114 IPR032675 -
Pte17g00213 927 SMART serkin_6 586 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00213 927 FunFam Putative LRR receptor-like serine/threonine-protein kinase 171 295 - -
Pte17g00213 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Pte17g00213 927 MobiDBLite consensus disorder prediction 889 927 - -
Pte17g00213 927 CDD STKc_IRAK 592 854 - -
Pte17g00213 927 Gene3D - 318 508 - -
Pte17g00213 927 Pfam Protein tyrosine and serine/threonine kinase 590 853 IPR001245 GO:0004672|GO:0006468
Pte17g00213 927 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 895 - -
Pte17g00213 927 Gene3D Ribonuclease Inhibitor 115 306 IPR032675 -
Pte17g00213 927 FunFam Leucine-rich repeat receptor protein kinase EMS1 7 104 - -
Pte17g00213 927 Pfam Leucine rich repeat 184 243 IPR001611 GO:0005515
Pte17g00213 927 SUPERFAMILY Protein kinase-like (PK-like) 569 880 IPR011009 -
Pte17g00213 927 Gene3D Transferase(Phosphotransferase) domain 1 662 863 - -
Pte17g00213 927 FunFam Putative LRR receptor-like serine/threonine-protein kinase 662 866 - -
Pte17g00213 927 ProSiteProfiles Protein kinase domain profile. 586 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00213 927 Pfam Malectin domain 319 504 IPR021720 -
Pte17g00213 927 FunFam Leucine-rich repeat receptor-like protein kinase 556 661 - -
Pte17g00213 927 FunFam Leucine-rich repeat receptor-like protein kinase 317 508 - -
Pte17g00213 927 ProSiteProfiles Leucine-rich repeat profile. 208 230 IPR001611 GO:0005515
Pte17g00213 927 Gene3D Phosphorylase Kinase; domain 1 561 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00213 Pte-Chr17 2717987 2728967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00213 41 928 Receptor kinase-like Gene Family AT1G56120 62.346 0.0 1146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte17g00213 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00213 - - qsa:O6P43_001204 1434.08