Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00210 ATGTTATGTTTCTTGCCGGCCCATAATTCGTGGGTGTCAATTAGTTTTCTTTCTTGCCCATGTTGTGGAGGTAGCTGCCTAGCTGGTGGTGCTGATATCGCAAAAAGCATAGTCCAGTTTGCAAGACGGCGTCAACGCGGTGTTTGTGTCCTCAGCGGTAGTGGTTCGGTGGCCAACGTAACCCTTAGACAGCCAGTAGCACCTGGAGCTATTGTGGCACTTCACGGTAGGTTTGAGATTCTATCTTTAAATGGAGCCTTCTTACCAGGATTAGCCCCACGAGTCGATTCAACTGGATTGATGGTGTATCTTGTCGGAGGTCAGGGGCAGGTTACTGGAGGAAGTGTTGTTCGGTCTTTGATAGCAGCAGGGCTAGTCATGGTCATCGCCGCAACTTTTGCTAATGCAACATATGAGAGGCTGCCCTTAGAAGATGATGATGAGGGAGGCAGTATTGCTCAAGGTGCTACTGGAACTCCCCATCTACAATAG 492 0.4919 MLCFLPAHNSWVSISFLSCPCCGGSCLAGGADIAKSIVQFARRRQRGVCVLSGSGSVANVTLRQPVAPGAIVALHGRFEILSLNGAFLPGLAPRVDSTGLMVYLVGGQGQVTGGSVVRSLIAAGLVMVIAATFANATYERLPLEDDDEGGSIAQGATGTPHLQ* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00210 163 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 155 IPR014476 GO:0003680
Pte17g00210 163 CDD DUF296 27 94 IPR005175 -
Pte17g00210 163 Pfam Plants and Prokaryotes Conserved (PCC) domain 27 134 IPR005175 -
Pte17g00210 163 Gene3D - 26 151 - -
Pte17g00210 163 ProSiteProfiles PPC domain profile profile. 17 156 IPR005175 -
Pte17g00210 163 SUPERFAMILY AF0104/ALDC/Ptd012-like 27 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00210 Pte-Chr17 2683221 2683712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00210 27 154 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 67.969 8.20e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00210 - - qsa:O6P43_003255 207.994