Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00205 ATGGAACCTAAAAATGAGGAATTCCATTCTGCATCTTATGCAGTTATTCAAGGAAACATGCGAGTGCGGGGTGAACAGGTTAGTACAAGAACGTCTGAAGTTAACATATCAGAAGCTAAACCTATGCTCAAATATTCAATACAGACTGGGGAGGAATTTGCTCTTGAATTTATGCAAGATTGGGCAAACCCTAGGAAACCTATGTTCCCAAATATTATAGGTGATTACAGTAATGCAACAAGCGACATGGAACTAGAACACATATTGGGTATTAATCGTACAGCATTAGAATCAGGTTCTAATATGTCTATGATGACGATGGTGAATAAGGATCGGTCAGAGTTGGCTGAGAAAAACTCCTTCCTCGATGAAAGCAGAAGCAGCTATGGTTTAGTACAATCAATTGGAAGAACTTCTAATAATGACAGCATACCAGAAGTTCTTCATGCTCATGTATCATCTGGATCCTCTAGTAGCTTCTTGTCTAAGATGAAGGTGCTTTGCAGCTTTGGGGGAAGAATATTGCGGAGGCCAAGTGATGGAAGACTACGGTATGTTGGGGGAGAGACACGTATTATTCGCATTGCAAGAGATATTGCTTGGAGGGAGCTTATGCAGAAGACATTATCGATTTATAGTCAGGCTCATGTGATTAAATATCAACTTCCTGGGGAGGATCTCGATGCCTTGGTATCTGTAACTTGTGATGAGGACTTGCACAATATGATGGAGGAATGTAATGATTTAGAAGATAGGGAAGGCTCGCAAAAACTTAGAATATTTTTGTGCTCTATGAGTGATGTGGATGATGGTCAGTTGGCTATGGGAAGTATGGATGGTGATTCTGAGGTCCAATATGTTGTTGCAGTCAATGGCATGGAGAGAGGATCAGGGGAAAAATCATCTATACTAGGTGAAGGCAATTCTCACCTGACTGGTAATTTTATCCCCTCTTCTGGTGATCAGCCTCAGGGTTCCACTGTAGCAACAACTAAACATGGTTACGGAGACTGTCCTATATTGCATGGTGTCCGAATGATGAATCCTGGGGAAACCGTGCAGTATCCTTTGCACTGTAGTTATGGTTCTGATAATTCTGTTCAAGGCAAAAAACAATCTCAACTTCCTCAATATGAACTCACTAATGGAAAAGATTTTGTGAACGGTGGACTGACTCTCAGTCAGGAGAACTGTTCGAAGACACTTTTAAGGCATGTGAAGAAGGCACATGATGGTTCACTTCAAAAAAGTAACTCTGTTAAAAATGTCCCTATGGAAAGAAAGTTTCACATCCCTACACGATTATCTGATGGAAATTTGAAAAATCATTATCCCGAAGCATTGGTTGCAGTTGCAGCAGCTGTAAGGGAAGGACAACTGCCTATTTTGGCATCGGAAGACAAGGTTATGCATCAGGAGATTGGTCCTTCGATTAGTGCTATCAATCCAATTCAGGTTCCAAAATCTAATGAAGATGACAATCATGGCATTGATTCTTCATCAAGTTATGGCCTTGGTCAAGCTTCTAATGCTGAGTCTAATGTAGTTGACACGAGTTGCCTTGAAGGACCTCCACAACCTAAGCATATCTACTACTCAGAGCGAGTCCCAAGGAGGCAGGCAGAGTTACTAAATCTGTCTTCAAAGTCGGATGATACACATGGTTCTGAGTTTCTCATGGCAAATTTCCAACCTGAGATCAGTCAACAAGATTTAACTGAATGCAGTGACAAATTTCTTAAAAGAAATTTGACCAGTCAGAATGAAAATGCTGGTGACTATACTGGTGGTGATGCTGTTACTGAATTTCACACGCACAATGAGATAACCAACGGCTGTAGTCAGATAAATCCAAGGCTTCAACATGGTAATTCTAACTTGAAGCAGGCATTACTGAGGAATGCAGGAAGTAAAAATGCTAGTGACAGAGATCCAGCTCTGAAGTCTCACTTCTGGAGAATCCATTCTAGAGATAACCTTAATGACCAAACAGGTGATGCGACCATGGAGACCTTGTCAGAAACCCATTCCTTATGCAATGATTCTTCTGTAAAGCAAAAAGATGATCCAATATTGAAACTTCCAGATATTGATTGTGATGTGAAATCTGATAAAGACTCCTCTGTGCAAGCACTTCCTCGGACATTGAACATGACTAGAGATGTTTCTGAGGAGTCTCGTTCAGATGGTGTCTCGAAACCAGCACAAGGTGATATTCTTATTGGCACTGATGACCAGTTTCCTCGCGATTTCCATCCCGATACAATTTCAGAAGTTATTTATGAAGAGTCATCTGATGTTTATCTATCCAAGGATGGTGTCGGCTTGCATTTAAACATGGAGAATCATGAACCTAACCATCGGCCATGTTTTCAGAAATCGGCACACGAAAGTGTTGATGACAAAGATGTTTCACATATAGACCATGATTATATCGATCTTCCATCTCATGTAAAGAAGGTGAAGGAGAAAGATAACAATTCTCGATATGTCACGTCTATAGCAGCGGAAGGGGTTCCCACGAGCCATGTGGAGCGGCACCTAAATCTTGCTGAAGATAACCAGGTTCCTAGAATACCTGAAGGTCAGAACACTTTCCTACATTCATATTATGATCAGTTGCAGGTGAACGTGACAGATAGCATGCAGTTTGATGTTATGATGGAAAACCTTGCGCTGCAGCAATCAGAATACGAGGATGTAGAACATCAATCAAGAAATATTGGTGTACCTCAGTTAGATGTCTTGCAAGATCTTGATATCAGTACCCTGCAGGTCATAAAAAATGAAGACCTTGAAGAGTTAAGGGAGTTGGGTTCTGGTACCTTTGGCACAGTATATCATGGAAAATGGAGAGGAACAGATGTTGCAATCAAGAGAATAAAAAAAAGCTGTTTCATAGGTCGATCATCCGAAGCTGAAAGATTGTCTATAGAGTTCTGGAGGGAAGCTGACATCCTCTCGAAGCTTCATCATCCGAATGTAGTAGCATTCTATGGTGTTGTCCAAGATGGACCAGGAGGGACCTTAGCAACTGTTACTGAATTCATGGTTAATGGTTCTCTTCGTCATGTTTTCTTGCGCAAAGATAGGTATCTTGATCATCGGAAGAGGCTTATAATTGCAATGGATGTCGCTTTCGGTATGGAGTACTTGCACTCAAAAAATATTGTTCATTTTGACTTAAAATGTGACAACTTGCTTGTGAACATGAAAGATCCATTGCGGCCAATATGTAAGGTTGGTGATTTTGGCCTGTCCAAAATGAAACGGAATACATTAGTTTCTGGAGGTGTGAGGGGAACTTTACCATGGATGGCGCCGGAGCTGCTGAATGGAAACAGCAACAAGGTCTCTGAGAAGGTAGTTGATGTATTCTCTTTCGGCATTGTGTTATGGGAGATTCTCACCGGTGAGGAGCCCTATGCAAACATGCATTATGGTGCAATAATAGGTGGTATCGTAAATAACACACTAAGACCAACCATCCCCAGTTACTGCGATAATGAGTGGAGAAGGCTAATGGAGCAGTGCTGGGCACCAAATCCTGCTGCCAGGCCATCATTCACGGAGATCGCAAGCTGCTTACGCGAAATGTCCACAGCTGCAAGTCTACCCAAAACACAAGGCCAGAAGGCATCTAAATGA 3648 0.4164 MEPKNEEFHSASYAVIQGNMRVRGEQVSTRTSEVNISEAKPMLKYSIQTGEEFALEFMQDWANPRKPMFPNIIGDYSNATSDMELEHILGINRTALESGSNMSMMTMVNKDRSELAEKNSFLDESRSSYGLVQSIGRTSNNDSIPEVLHAHVSSGSSSSFLSKMKVLCSFGGRILRRPSDGRLRYVGGETRIIRIARDIAWRELMQKTLSIYSQAHVIKYQLPGEDLDALVSVTCDEDLHNMMEECNDLEDREGSQKLRIFLCSMSDVDDGQLAMGSMDGDSEVQYVVAVNGMERGSGEKSSILGEGNSHLTGNFIPSSGDQPQGSTVATTKHGYGDCPILHGVRMMNPGETVQYPLHCSYGSDNSVQGKKQSQLPQYELTNGKDFVNGGLTLSQENCSKTLLRHVKKAHDGSLQKSNSVKNVPMERKFHIPTRLSDGNLKNHYPEALVAVAAAVREGQLPILASEDKVMHQEIGPSISAINPIQVPKSNEDDNHGIDSSSSYGLGQASNAESNVVDTSCLEGPPQPKHIYYSERVPRRQAELLNLSSKSDDTHGSEFLMANFQPEISQQDLTECSDKFLKRNLTSQNENAGDYTGGDAVTEFHTHNEITNGCSQINPRLQHGNSNLKQALLRNAGSKNASDRDPALKSHFWRIHSRDNLNDQTGDATMETLSETHSLCNDSSVKQKDDPILKLPDIDCDVKSDKDSSVQALPRTLNMTRDVSEESRSDGVSKPAQGDILIGTDDQFPRDFHPDTISEVIYEESSDVYLSKDGVGLHLNMENHEPNHRPCFQKSAHESVDDKDVSHIDHDYIDLPSHVKKVKEKDNNSRYVTSIAAEGVPTSHVERHLNLAEDNQVPRIPEGQNTFLHSYYDQLQVNVTDSMQFDVMMENLALQQSEYEDVEHQSRNIGVPQLDVLQDLDISTLQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFIGRSSEAERLSIEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVNGSLRHVFLRKDRYLDHRKRLIIAMDVAFGMEYLHSKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKMKRNTLVSGGVRGTLPWMAPELLNGNSNKVSEKVVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDNEWRRLMEQCWAPNPAARPSFTEIASCLREMSTAASLPKTQGQKASK* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00205 1215 MobiDBLite consensus disorder prediction 703 747 - -
Pte17g00205 1215 ProSitePatterns Protein kinases ATP-binding region signature. 938 963 IPR017441 GO:0005524
Pte17g00205 1215 PRINTS Tyrosine kinase catalytic domain signature 1051 1069 IPR001245 GO:0004672|GO:0006468
Pte17g00205 1215 PRINTS Tyrosine kinase catalytic domain signature 1014 1027 IPR001245 GO:0004672|GO:0006468
Pte17g00205 1215 PRINTS Tyrosine kinase catalytic domain signature 1167 1189 IPR001245 GO:0004672|GO:0006468
Pte17g00205 1215 PRINTS Tyrosine kinase catalytic domain signature 1123 1145 IPR001245 GO:0004672|GO:0006468
Pte17g00205 1215 CDD STKc_MAP3K-like 938 1192 - -
Pte17g00205 1215 CDD PB1_UP2 167 262 - -
Pte17g00205 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1020 1213 - -
Pte17g00205 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 183 265 - -
Pte17g00205 1215 Gene3D - 184 265 - -
Pte17g00205 1215 SMART serkin_6 932 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00205 1215 Pfam Protein tyrosine and serine/threonine kinase 933 1196 IPR001245 GO:0004672|GO:0006468
Pte17g00205 1215 SUPERFAMILY Protein kinase-like (PK-like) 921 1195 IPR011009 -
Pte17g00205 1215 SMART PB1_new 178 265 IPR000270 GO:0005515
Pte17g00205 1215 MobiDBLite consensus disorder prediction 480 509 - -
Pte17g00205 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1057 1069 IPR008271 GO:0004672|GO:0006468
Pte17g00205 1215 ProSiteProfiles Protein kinase domain profile. 932 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g00205 1215 Pfam PB1 domain 180 262 IPR000270 GO:0005515
Pte17g00205 1215 SUPERFAMILY CAD & PB1 domains 179 267 - -
Pte17g00205 1215 Gene3D Phosphorylase Kinase; domain 1 925 1019 - -
Pte17g00205 1215 Gene3D Transferase(Phosphotransferase) domain 1 1020 1215 - -
Pte17g00205 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 925 1019 - -
Pte17g00205 1215 PANTHER SERINE-THREONINE PROTEIN KINASE 208 1198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00205 Pte-Chr17 2631499 2639891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00205 35 571 MAP Kinase Kinase Kinase AT1G16270 36.705 1.23e-76 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pte17g00205 PK_Tyr_Ser-Thr 1.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00205 - - jre:109011256 1152.89