Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00202 ATGAAGAAATTGATCAGCAAGCTTTCGCGAGTTGCGGACTCGTCTCAGTACACTCTCCTTCGATCCGACTCGCAGACTCGGCGTGCACCGCGGCGAGCGGAGTCTTTCAGAGCCGTGGCTGCGAAAATCCGACGATCTGGACCATTGAAATCGACGCCGGGAGTACCTCAAGGTCACGTGCCTGTTTTCGTCGGCGACGAGATGGAGAGGTTCGTGGTGAGTGCTGAGTTGCTGAACCATCCGGTCTTTGTGAAGCTCTTGAACAAGTCGGCACAGGAGTACGGCTACGAACAGAAAGGCGTGCTCCGGATTCCATGTCACGTGATTGTTTTCGAACGTGTTCTTGAAGCGCTTCGTCTTGGTCATCACGAGTCAAGTGATCTTCAGGACTTGCTTCATTCCATGTCCGATGAGTTTTTCTGA 423 0.5296 MKKLISKLSRVADSSQYTLLRSDSQTRRAPRRAESFRAVAAKIRRSGPLKSTPGVPQGHVPVFVGDEMERFVVSAELLNHPVFVKLLNKSAQEYGYEQKGVLRIPCHVIVFERVLEALRLGHHESSDLQDLLHSMSDEFF* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00202 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 114 IPR003676 GO:0009733
Pte17g00202 140 Pfam Auxin responsive protein 35 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00202 Pte-Chr17 2566052 2567211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00202 43 118 Calmodulin-binding Proteins AT4G31320 39.474 7.91e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00202 K14488 - qsa:O6P43_001206 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte17g00202 17 2566052 2567211 Pte17g00202 17 2566052 2567211 RCT