Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g00186 ATGGCTGATAACTTCAACTTCAAGTTAGGCACAGAAGTGGAGGTTACAAGCTCTGACCAGAAGCTGCGTCGTGCCCTTTTCCCTGGAAAAATCATCGGCCGTAACGTGAAGGCCAAGAACAAGTTAATAGTGGAGTACGATTTTAAAAGGGACAAGAACACAAAAAAAGCCATCAGGGAAGAGGTAAGTGTGTCCATGGTGAGGCCTCGGCCACCTAAGCAAAAGAACTATGAGTTCAAGTTCGGCGATACTGTTGACGCATTCTCTGGTAACAGCTGGTGGGAAGGTGTGATCACTGAGGTTTTAGACAACCCAATCAGGTTTAGTGTTTACTTAAAGTTTTCCAGAAGAGCTTTTGTTTTGGACCCCTCAAAACTAAGGCTTCACCAGGAGTGGGTGAATGGAGTTTGGATTCCTTCTACTGATGATCATGGGGAAGCTCCTCCCCACTATAAACCAGCGACAGTTAAGGAAAGGATAAGAAAAGAAATTACTAAAGGCATGGAGGTTGAAGTTAGTAATGATGAAGAAGGGTTTGAAGGTGCTTGGTATGCTGCTACCGTTCTCAAAGTACTGGAAGATAATAAGTTCCTAATTGAGTACCAAAGCTTGAGAACAGATGACAATGAAGAGCTCTTGAAGGAAGAGGTTGATGTAAATCACATAAGACCTTGTCCACCAAAGATTGTCCTTGTTGATGGTTTCAACCTGGGTGATGAGGTTGAAGCTTTCTGCAATGATGGATGGTGGGAAGGACAAGTTAGTAAAGTACGTCGTGATTTAAGATATAGAGTTTATTTTGAAAAAACTGATGATTCCGGCGAGTTTCCCCTATCAAAGTTAAGGCCGCGACAGGTGTGGATGGATGCAACATGGGTTATGGCTTCTCAGCTATGA 897 0.4326 MADNFNFKLGTEVEVTSSDQKLRRALFPGKIIGRNVKAKNKLIVEYDFKRDKNTKKAIREEVSVSMVRPRPPKQKNYEFKFGDTVDAFSGNSWWEGVITEVLDNPIRFSVYLKFSRRAFVLDPSKLRLHQEWVNGVWIPSTDDHGEAPPHYKPATVKERIRKEITKGMEVEVSNDEEGFEGAWYAATVLKVLEDNKFLIEYQSLRTDDNEELLKEEVDVNHIRPCPPKIVLVDGFNLGDEVEAFCNDGWWEGQVSKVRRDLRYRVYFEKTDDSGEFPLSKLRPRQVWMDATWVMASQL* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g00186 298 Pfam Agenet domain 238 284 IPR008395 -
Pte17g00186 298 Pfam Agenet domain 10 72 IPR008395 -
Pte17g00186 298 Pfam Agenet domain 167 227 IPR008395 -
Pte17g00186 298 CDD Tudor_Agenet_AtDUF_rpt1_3 164 227 - -
Pte17g00186 298 Gene3D - 147 235 - -
Pte17g00186 298 CDD Tudor_Agenet_AtDUF_rpt2_4 82 128 - -
Pte17g00186 298 CDD Tudor_Agenet_AtDUF_rpt2_4 237 283 - -
Pte17g00186 298 CDD Tudor_Agenet_AtDUF_rpt1_3 7 72 - -
Pte17g00186 298 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 159 296 - -
Pte17g00186 298 SMART agenet_At_2 5 75 IPR014002 -
Pte17g00186 298 SMART agenet_At_2 162 230 IPR014002 -
Pte17g00186 298 SMART agenet_At_2 233 289 IPR014002 -
Pte17g00186 298 SMART agenet_At_2 77 134 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g00186 Pte-Chr17 2321904 2324502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g00186 176 291 PHD Transcription Factor Family AT5G58610 32.847 7.71e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g00186 - - cave:132189951 311.612